zr3644_12_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 15735538 lines in total Total number of methylation call strings processed: 31471076 Final Cytosine Methylation Report ================================= Total number of C's analysed: 367870994 Total methylated C's in CpG context: 5088445 Total methylated C's in CHG context: 270615 Total methylated C's in CHH context: 1111798 Total C to T conversions in CpG context: 40900863 Total C to T conversions in CHG context: 62547662 Total C to T conversions in CHH context: 257951611 C methylated in CpG context: 11.1% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%