zr3644_11_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 18648722 lines in total Total number of methylation call strings processed: 37297444 Final Cytosine Methylation Report ================================= Total number of C's analysed: 439858992 Total methylated C's in CpG context: 6792165 Total methylated C's in CHG context: 340767 Total methylated C's in CHH context: 1351971 Total C to T conversions in CpG context: 49719278 Total C to T conversions in CHG context: 77181294 Total C to T conversions in CHH context: 304473517 C methylated in CpG context: 12.0% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%