zr3644_10_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 17225745 lines in total Total number of methylation call strings processed: 34451490 Final Cytosine Methylation Report ================================= Total number of C's analysed: 407708793 Total methylated C's in CpG context: 6463484 Total methylated C's in CHG context: 315560 Total methylated C's in CHH context: 1254377 Total C to T conversions in CpG context: 46100397 Total C to T conversions in CHG context: 71773057 Total C to T conversions in CHH context: 281801918 C methylated in CpG context: 12.3% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%