File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
zr3644_10_R1.fastp-trim.20201206_bismark_bt2_pe.bam	51598026	19466124	27198263	4932755	884	2240379	17225745	407708793	6463484	46100397	315560	71773057	1254377	281801918
zr3644_11_R1.fastp-trim.20201206_bismark_bt2_pe.bam	55732442	21035239	29367085	5329143	975	2386517	18648722	439858992	6792165	49719278	340767	77181294	1351971	304473517
zr3644_12_R1.fastp-trim.20201206_bismark_bt2_pe.bam	46634543	17657963	24771302	4204536	742	1922425	15735538	367870994	5088445	40900863	270615	62547662	1111798	257951611
zr3644_13_R1.fastp-trim.20201206_bismark_bt2_pe.bam	52950721	19984513	28114199	4851106	903	2321782	17662731	427676475	6502393	47981015	335205	74622637	1334605	296900620
zr3644_14_R1.fastp-trim.20201206_bismark_bt2_pe.bam	36184563	13542524	19378814	3262685	540	1367138	12175386	288813843	4988717	31936140	233913	50526206	918413	200210454
zr3644_15_R1.fastp-trim.20201206_bismark_bt2_pe.bam	58102004	22134825	30647323	5318945	911	2539777	19595048	468134760	7640366	52140889	369842	81627664	1479955	324876044
zr3644_16_R1.fastp-trim.20201206_bismark_bt2_pe.bam	50134077	19218042	25898695	5016561	779	2260445	16957597	382781966	5910985	43275050	296157	67314545	1171795	264813434
zr3644_17_R1.fastp-trim.20201206_bismark_bt2_pe.bam	57127374	21997311	29217690	5911424	949	2651789	19345522	460296504	7051331	52422274	367618	81263551	1456363	317735367
zr3644_18_R1.fastp-trim.20201206_bismark_bt2_pe.bam	50675924	19761566	26011820	4901684	854	2125597	17635969	418432386	6485534	47232125	331791	73829736	1308830	289244370
zr3644_19_R1.fastp-trim.20201206_bismark_bt2_pe.bam	48336315	18400028	25394391	4541134	762	1884922	16515106	393583006	5892422	44447937	306133	68992850	1222555	272721109
zr3644_1_R1.fastp-trim.20201206_bismark_bt2_pe.bam	50613363	19322554	26287539	5002357	913	2296882	17025672	393879492	5522806	44827263	295264	69333931	1171018	272729210
zr3644_20_R1.fastp-trim.20201206_bismark_bt2_pe.bam	53149153	18172752	30546046	4429668	687	1994399	16178353	392050055	5957717	44300730	310331	68625359	1231939	271623979
zr3644_21_R1.fastp-trim.20201206_bismark_bt2_pe.bam	50165026	18662636	26951097	4550478	815	2067696	16594940	399488670	6100968	45081646	311854	69907149	1238820	276848233
zr3644_22_R1.fastp-trim.20201206_bismark_bt2_pe.bam	46739729	18024356	24265313	4449314	746	2022913	16001443	384123373	5860168	43577975	306457	67741077	1207901	265429795
zr3644_23_R1.fastp-trim.20201206_bismark_bt2_pe.bam	39675229	15279747	20537283	3857514	685	1699048	13580699	319217422	4796647	36244726	251840	56117649	1001795	220804765
zr3644_24_R1.fastp-trim.20201206_bismark_bt2_pe.bam	51969546	20005940	27019300	4943448	858	2297338	17708602	424334642	6426886	48012879	334748	74644900	1323628	293591601
zr3644_2_R1.fastp-trim.20201206_bismark_bt2_pe.bam	54652876	20368984	29274584	5008437	871	2468807	17900177	440995801	6524098	49502508	336393	76570408	1347203	306715191
zr3644_3_R1.fastp-trim.20201206_bismark_bt2_pe.bam	38671370	14494385	20552780	3623543	662	1438377	13056008	312548188	4701641	35244801	237043	54545872	948037	216870794
zr3644_4_R1.fastp-trim.20201206_bismark_bt2_pe.bam	49072984	18287632	26298409	4486274	669	2047795	16239837	385896195	5636835	43385065	284080	66885343	1138667	268566205
zr3644_5_R1.fastp-trim.20201206_bismark_bt2_pe.bam	43865548	16133540	23833705	3897672	631	1655760	14477780	347116867	5264304	38821341	268683	60538663	1069376	241154500
zr3644_6_R1.fastp-trim.20201206_bismark_bt2_pe.bam	52883485	20159510	27836055	4887113	807	2354836	17804674	424685961	6360295	47688586	329265	74108907	1324855	294874053
zr3644_7_R1.fastp-trim.20201206_bismark_bt2_pe.bam	81002273	30150686	43523098	7327170	1319	3300145	26850541	644300662	9851900	71957703	499230	111910013	2005314	448076502
zr3644_8_R1.fastp-trim.20201206_bismark_bt2_pe.bam	42084665	15895095	22183581	4005337	652	1652250	14242845	336126373	5237785	37832107	267711	58950807	1067626	232770337
zr3644_9_R1.fastp-trim.20201206_bismark_bt2_pe.bam	47320068	18359837	24005782	4953682	767	2224272	16135565	360970772	5802078	40875939	274442	63778463	1088151	249151699