zr3644_9_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 25606232 lines in total Total number of methylation call strings processed: 51212464 Final Cytosine Methylation Report ================================= Total number of C's analysed: 581087866 Total methylated C's in CpG context: 8086032 Total methylated C's in CHG context: 479498 Total methylated C's in CHH context: 2089186 Total C to T conversions in CpG context: 65981858 Total C to T conversions in CHG context: 100761982 Total C to T conversions in CHH context: 403689310 C methylated in CpG context: 10.9% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%