zr3644_5_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 24155648 lines in total Total number of methylation call strings processed: 48311296 Final Cytosine Methylation Report ================================= Total number of C's analysed: 587256545 Total methylated C's in CpG context: 7677529 Total methylated C's in CHG context: 490345 Total methylated C's in CHH context: 2093840 Total C to T conversions in CpG context: 65780729 Total C to T conversions in CHG context: 100557046 Total C to T conversions in CHH context: 410657056 C methylated in CpG context: 10.5% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%