zr3644_23_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 21887129 lines in total Total number of methylation call strings processed: 43774258 Final Cytosine Methylation Report ================================= Total number of C's analysed: 521118629 Total methylated C's in CpG context: 6813705 Total methylated C's in CHG context: 441954 Total methylated C's in CHH context: 1898020 Total C to T conversions in CpG context: 59199373 Total C to T conversions in CHG context: 89987061 Total C to T conversions in CHH context: 362778516 C methylated in CpG context: 10.3% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%