zr3644_21_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 27363020 lines in total Total number of methylation call strings processed: 54726040 Final Cytosine Methylation Report ================================= Total number of C's analysed: 668808705 Total methylated C's in CpG context: 8829172 Total methylated C's in CHG context: 562477 Total methylated C's in CHH context: 2398853 Total C to T conversions in CpG context: 75508229 Total C to T conversions in CHG context: 114890165 Total C to T conversions in CHH context: 466619809 C methylated in CpG context: 10.5% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%