zr3644_1_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 27761215 lines in total Total number of methylation call strings processed: 55522430 Final Cytosine Methylation Report ================================= Total number of C's analysed: 652509614 Total methylated C's in CpG context: 7936786 Total methylated C's in CHG context: 525710 Total methylated C's in CHH context: 2275329 Total C to T conversions in CpG context: 74140001 Total C to T conversions in CHG context: 112783027 Total C to T conversions in CHH context: 454848761 C methylated in CpG context: 9.7% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%