zr3644_19_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 26856127 lines in total Total number of methylation call strings processed: 53712254 Final Cytosine Methylation Report ================================= Total number of C's analysed: 649151629 Total methylated C's in CpG context: 8434745 Total methylated C's in CHG context: 544466 Total methylated C's in CHH context: 2354921 Total C to T conversions in CpG context: 73351172 Total C to T conversions in CHG context: 111793257 Total C to T conversions in CHH context: 452673068 C methylated in CpG context: 10.3% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%