zr3644_18_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 28210284 lines in total Total number of methylation call strings processed: 56420568 Final Cytosine Methylation Report ================================= Total number of C's analysed: 677785584 Total methylated C's in CpG context: 9144375 Total methylated C's in CHG context: 577832 Total methylated C's in CHH context: 2466511 Total C to T conversions in CpG context: 76529541 Total C to T conversions in CHG context: 117538805 Total C to T conversions in CHH context: 471528520 C methylated in CpG context: 10.7% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%