zr3644_16_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 27465809 lines in total Total number of methylation call strings processed: 54931618 Final Cytosine Methylation Report ================================= Total number of C's analysed: 630642910 Total methylated C's in CpG context: 8455671 Total methylated C's in CHG context: 525816 Total methylated C's in CHH context: 2264120 Total C to T conversions in CpG context: 71325293 Total C to T conversions in CHG context: 108801283 Total C to T conversions in CHH context: 439270727 C methylated in CpG context: 10.6% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%