zr3644_13_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 28813362 lines in total Total number of methylation call strings processed: 57626724 Final Cytosine Methylation Report ================================= Total number of C's analysed: 706165084 Total methylated C's in CpG context: 9316772 Total methylated C's in CHG context: 595443 Total methylated C's in CHH context: 2559208 Total C to T conversions in CpG context: 79271442 Total C to T conversions in CHG context: 121088433 Total C to T conversions in CHH context: 493333786 C methylated in CpG context: 10.5% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%