zr3644_12_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 25709252 lines in total Total number of methylation call strings processed: 51418504 Final Cytosine Methylation Report ================================= Total number of C's analysed: 610219881 Total methylated C's in CpG context: 7329386 Total methylated C's in CHG context: 479331 Total methylated C's in CHH context: 2066164 Total C to T conversions in CpG context: 68031292 Total C to T conversions in CHG context: 101907222 Total C to T conversions in CHH context: 430406486 C methylated in CpG context: 9.7% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%