zr3644_11_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 30244124 lines in total Total number of methylation call strings processed: 60488248 Final Cytosine Methylation Report ================================= Total number of C's analysed: 722634891 Total methylated C's in CpG context: 9665871 Total methylated C's in CHG context: 605782 Total methylated C's in CHH context: 2620199 Total C to T conversions in CpG context: 81795117 Total C to T conversions in CHG context: 124554490 Total C to T conversions in CHH context: 503393432 C methylated in CpG context: 10.6% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%