zr1394_8_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 8537033 lines in total Total number of methylation call strings processed: 8537033 Final Cytosine Methylation Report ================================= Total number of C's analysed: 51677627 Total methylated C's in CpG context: 6649597 Total methylated C's in CHG context: 247967 Total methylated C's in CHH context: 3261945 Total C to T conversions in CpG context: 1131323 Total C to T conversions in CHG context: 9857922 Total C to T conversions in CHH context: 30528873 C methylated in CpG context: 85.5% C methylated in CHG context: 2.5% C methylated in CHH context: 9.7%