/volume1/web/halfshell/genomic-databank/Crassostrea_gigas.oyster_v9.dna_sm.toplevel/

This directory contains the Crassostrea_gigas.oyster_v9.dna_sm.toplevel.fa FastA and correspondng FastA index file.

It also contains the Bisulfite_Genome subdirectories generated by Bismark and bowtie2.

See the SBATCH script below for details on Bisulfite_Genome creation.

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FILES:

- 20190221_cgigas_genome_prep_bismark.sh: Mox SBATCH script used to generate Bisulfite_Genome.

- Crassostrea_gigas.oyster_v9.dna_sm.toplevel.fa: FastA file.

- Crassostrea_gigas.oyster_v9.dna_sm.toplevel.fa.fai: Index file (via samtools faidx) of FastA.