Sample	Bismark_mqc_generalstats_bismark_aligned_reads	Bismark_mqc_generalstats_bismark_percent_aligned	Bowtie 2 / HiSAT2_mqc_generalstats_bowtie_2_hisat2_overall_alignment_rate
10--1E7-1-bismark			54.82
10--1E7_R1_001	22.754436	57.96571595101667	
1A1-4-bismark			55.88
1A10-2-bismark			54.65
1A10_R1_001	23.532380999999997	56.74736653630722	
1A12-3-bismark			57.05
1A12_R1_001	25.470332	60.508960435875494	
1A1_R1_001	23.407118	59.60061145890903	
1A3-5-bismark			55.12
1A3_R1_001	26.231513	55.758262359015774	
1A5-6-bismark			57.21
1A5_R1_001	24.604547	58.467055174193206	
1A6-7-bismark			0.24
1A6_R1_001	22.027507999999997	60.07245071729111	
1A8-8-bismark			57.65
1A8_R1_001	26.802491	50.519236710199024	
1B1-10-bismark			55.93
1B10-9-bismark			57.0
1B10_R1_001	31.249962999999997	54.93728949324237	
1B1_R1_001	23.809599	59.08553409147562	
1B2-11-bismark			54.42
1B2_R1_001	29.242095	57.588624690350386	
1B4-12-bismark			0.37
1B4_R1_001	28.595564999999997	63.20332897147991	
1B5-13-bismark			53.97
1B5_R1_001	24.596515999999998	60.0372962528223	
1C6-14-bismark			58.74
1C6_R1_001	21.295296999999998	57.64643981148645	
1C8-15-bismark			56.41
1C8_R1_001	26.282922	59.6026685601941	
1C9-16-bismark			55.1
1C9_R1_001	24.738643	60.84204899224276	
1D3-17-bismark			59.58
1D3_R1_001	24.271501	61.70338345988905	
1D7-18-bismark			57.31
1D7_R1_001	22.128992999999998	60.25558461672723	
1D8-19-bismark			0.21
1D8_R1_001	23.087653	57.58449850288778	
1D9-20-bismark			55.66
1D9_R1_001	24.084305	52.977450531854174	
1F1-21-bismark			58.6
1F1_R1_001	29.094285	62.19485002015103	
1F5-22-bismark			56.0
1F5_R1_001	27.090925	59.100693125580584	
1F7-23-bismark			57.93
1F7_R1_001	22.183594	61.829869870046196	
1F9-24-bismark			0.24
1F9_R1_001	22.913674999999998	60.45998261005442	
1G4-25-bismark			2.28
1G4_R1_001	0.74241	2.1521223919636934	
1G5-26-bismark			54.08
1G5_R1_001	21.757241999999998	50.98324847389387	
1H11-27-bismark			52.84
1H11_R1_001	19.937438	52.507771042599124	
1H2-28-bismark			0.36
1H2_R1_001	23.605197999999998	53.41473424655885	
1H3-29-bismark			56.05
1H3_R1_001	24.126112	61.49562549842615	
1H5-30-bismark			0.37
1H5_R1_001	21.954966	53.68355720344593	
1H6-31-bismark			51.13
1H6_R1_001	21.131314	54.33164850560619	
1H9-32-bismark			0.27
1H9_R1_001	24.067987	58.2850324643544	
2A3-33-bismark			54.62
2A3_R1_001	19.848121	58.69858795977693	
2C2-34-bismark			55.6
2C2_R1_001	23.778302999999998	55.9261066974105	
2D1-35-bismark			0.34
2D1_R1_001	23.193848	60.795208318529134	
2D2-36-bismark			54.58
2D2_R1_001	17.677818	58.84746528694493	
2G2-37-bismark			55.3
2G2_R1_001	26.4519	60.62776237604519	
2H3-38-bismark			0.23
2H3_R1_001	18.852698999999998	58.7242123921062	
39--2E2-39-bismark			0.36
39--2E2_R1_001	22.802024	58.74820289611692	
6--1E3-40-bismark			0.28
6--1E3_R1_001	28.414628999999998	58.530515323268574