Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: ptg000018l:2286780-2286870 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_9706.ps.pdf
Locus Name: Cluster_9706
AUUUCAAUUAGCUAGGUCAGUGUUUGAACAGUCCAAGUAGCAGUUAUUGUUCUUUGCACUGUUCAAACCCUGCCCUACCUAGCCAUUUGGG
...((((...((((((((((.(((((((((((.((((.((((.....)))).)))).))))))))))).)))....)))))))...)))). (-35.30)
.UUUCAAUUAGCUAGGUCA........................................................................ len:18 al:1
.UUUCAAUUAGCUAGGUCAG....................................................................... len:19 al:1
..UUCAAUUAGCUAGGUCAGU...................................................................... len:19 al:3
.....AAUUAGCUAGGUCAGUGUUUGAACAGU........................................................... len:27 al:1
.........AGCUAGGUCAGUGUUUGAACA............................................................. len:21 al:1
................UCAGUGUUUGAACAGUCCAAGUAGCAGc............................................... len:28 al:1
..................AGUGUUUGAACAGUCCAAGUAGCAuU............................................... len:26 al:1
..................AGUGUUUGAACAGUCCAAGUAGCA................................................. len:24 al:9
..................AGUGUUcGAACAGUCCAAGUAGC.................................................. len:23 al:1
..................AGUGUUUGAACAGUCCAAGU..................................................... len:20 al:2
..................AGUGUUUGAgCAGUCCAAGUAGC.................................................. len:23 al:1
..................AGUGUUUGAACAGUCCAAGUAGg.................................................. len:23 al:1
..................AGUGUUUGAACAGUCCAAGUAGC.................................................. len:23 al:11
...................GUGUUUGAACAGUCCAAGUAGCAGU............................................... len:25 al:2
...................GUGUUUGAACAGUCCAAGUAGCA................................................. len:23 al:13
...................GUGUUUGAACAGUCCAAGUAG................................................... len:21 al:1
...................GUGUUUGAACAGUCCAAGUgGC.................................................. len:22 al:1
...................GUGUUUGAACAGUCCAAGU..................................................... len:19 al:1
...................GgGUUUGAACAGUCCAAGUAGC.................................................. len:22 al:1
...................GUGUaUGAACAGUCCAAGUAGC.................................................. len:22 al:2
...................GUGUUUGAACAGUCCAAGUA.................................................... len:20 al:2
...................GUGUUUGAACAGUCCAAGUAGC.................................................. len:22 al:20
...................GUGUUUGAACAGUCCAAGUAGu.................................................. len:22 al:5
...................GUGUUUGAACAGUCCAAGUAGCAGUU.............................................. len:26 al:1
...................GUaUUUGAACAGUCCAAGUAGC.................................................. len:22 al:1
...................GUGUUUGAACAGUCCAAGUAGa.................................................. len:22 al:1
....................UGUUUGAACcGUCCAAGUAGC.................................................. len:21 al:1
....................UaUUUGAACAGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAuGU..................................................... len:18 al:1
....................UGUUUGAAuAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUcUGAACAGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAuGUAGCA................................................. len:22 al:1
....................UGUUUGAACgGUCCAAGUAGCA................................................. len:22 al:2
....................UGUUUGAACAGUCCAAGUAGCu................................................. len:22 al:10
....................UGUUUGAACAGUCCuAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGcAGCA................................................. len:22 al:1
....................UGUUUGgACAGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAGC.................................................. len:21 al:151
....................UGUUUGAACAGUCCAAGUAGCAGU............................................... len:24 al:4
....................UGUUUGAgCAGUCCAAGU..................................................... len:18 al:1
....................UGUUUGAgCAGUCCAAGUAGC.................................................. len:21 al:3
....................UGUUUGAACgGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAGCAu................................................ len:23 al:4
....................UGUUUGAACAGcCCAAGUAGCAGUU.............................................. len:25 al:1
....................UGUUUGuACAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCAuU............................................... len:24 al:5
....................UGUUUGAACAGUCCAAGUAGCc................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAG................................................... len:20 al:4
....................UGUUUGAACAGUCCgAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGU..................................................... len:18 al:19
....................UGUUUGAcCAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCg................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCA................................................. len:22 al:117
....................UGUUUGAACAGUCCAAGc..................................................... len:18 al:1
....................UGUUcGAACAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCAGUUAUUGUU........................................ len:31 al:1
....................UGUUUGAACAGUCCAAGUA.................................................... len:19 al:9
....................UGUUUGAACAGUCCAAGUAGCAuUU.............................................. len:25 al:2
....................UGUUUGAACAGUCCAAGUAaCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCAG................................................ len:23 al:1
....................UGUUUGAACAGUCCAAGUAGa.................................................. len:21 al:2
....................UGUUUGAACAGUCCAAGUAGu.................................................. len:21 al:14
....................UGUUUGgACAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUuCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCAGUUAUUG.......................................... len:29 al:1
.....................GUUUGAACcGUCCAAGUAGC.................................................. len:20 al:1
.....................GUUUGAACAGUCCAAGUAGC.................................................. len:20 al:13
.....................GUUUGAACAGUCCAAGUAGuA................................................. len:21 al:1
.....................GUUUGAgCAGUCCAAGUAGCA................................................. len:21 al:1
.....................GUUUGAACAGUCCAAGUAGCu................................................. len:21 al:2
.....................GUUUGAACAGUCCAAGUAGu.................................................. len:20 al:4
.....................GUUUGAACAGUCCAAGUAGCA................................................. len:21 al:30
.....................GUUUGAACAGUCCAAGUAGCAGUc.............................................. len:24 al:1
.....................GUUUGAACAGUCCAAGUAGCAu................................................ len:22 al:1
.....................GUUUGAACAGUCCgAGUAGCAGU............................................... len:23 al:2
.....................GUUUGAACAGUCCAAGUAGCAuU............................................... len:23 al:3
.....................GUUUGAACAGUCCAAGUAGCg................................................. len:21 al:2
......................UUUGAACAGUCCAAGUAGC.................................................. len:19 al:13
......................UUUGAACAGUCCAAGUAGCA................................................. len:20 al:1
......................UUUGAACAGUCCAAGUAGCAGUU.............................................. len:23 al:3
......................UUUGAACAGUCCAAGUAGCAu................................................ len:21 al:1
......................UUUGAACAGUCCAAGUAGu.................................................. len:19 al:4
......................UUUGAACAGUCCAAGUAGCAGUUAa............................................ len:25 al:1
......................UUUGAACAGUCCAAGUAGCAGUUAc............................................ len:25 al:1
......................UUUGAACAGUCCAAGUAGCAG................................................ len:21 al:1
......................UUUGAACAGUCCAAGUAGCAGUUAUU........................................... len:26 al:1
......................UUUGAACAGUCCAAGUAGCAGU............................................... len:22 al:4
......................UUUGAACAGUCCAAGUAGCAGUUAUUGUU........................................ len:29 al:1
......................UUUGcACAGUCCAAGUAGCA................................................. len:20 al:1
.......................UUGAACAGUCCAAGUAGC.................................................. len:18 al:1
.......................UUGAACAGUCCAAGUAGCAGU............................................... len:21 al:2
.......................UUGAACAGUCCAAGUAGCAGUU.............................................. len:22 al:2
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCCUG................... len:31 al:2
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCu..................... len:29 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACC...................... len:28 al:6
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCCUa................... len:31 al:2
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCCU.................... len:30 al:6
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACu...................... len:28 al:3
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCa..................... len:29 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAgCCCU.................... len:30 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUC........................... len:23 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCC..................... len:29 al:2
..........................................GUUAUUGUUCUUUGCACUGUUCAAACCCU.................... len:29 al:4
..........................................GUUAUUGUUCUUUGCACaGUUCAAACCCU.................... len:29 al:1
..........................................GUUAUUGUUCUUUGCACUGUUCAAACCCc.................... len:29 al:1
............................................cAUUGUUCUUUGCACUGUUCAAACCCU.................... len:27 al:1
..............................................UUGUUCUUUGCACUGUUCAAACCCUGu.................. len:27 al:1
................................................GUUCUUUGCACUGUUCAAACCCU.................... len:23 al:1
................................................cUUCUUUGCACUGUUCAAACCCUGC.................. len:25 al:1
................................................GUUCUUUGCACUGUUCAAACCCUGC.................. len:25 al:1
.................................................UUCUUUGCACUGUUCcAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCCcGCC................. len:25 al:1
.................................................UUCUUUGCACUGUUCAAgCCC..................... len:21 al:2
.................................................UUCUUUGCcCUGUUCAAACCCU.................... len:22 al:8
.................................................UUCUUUGCACUGUUCAAACCCUGa.................. len:24 al:27
.................................................UUCUUUGCACUGUUCA.......................... len:16 al:3
.................................................UUCUUUGCACUGUUCAAACCg..................... len:21 al:7
.................................................UUCcUUGCACUGUUCAAACCC..................... len:21 al:7
.................................................UUCUUUGCACUGUUCAAu........................ len:18 al:2
.................................................cUCUUUGCACUGUUCAAACCCUG................... len:23 al:2
.................................................cUCUUUGCACUGUUCAAACCCU.................... len:22 al:11
.................................................UUCUUcGCACUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUcUGCACUGUUCAAACC...................... len:20 al:2
.................................................UUCUUUGCACUGUUCAAACCCUuCCC................ len:26 al:1
.................................................UUCUUUGCgCUGUUCAAACCCU.................... len:22 al:14
.................................................aUCUUUGCACUGUUCAAACCCU.................... len:22 al:2
.................................................UUCUUUGCACaGUUCAAACCCU.................... len:22 al:1
.................................................UUCUUaGCACUGUUCAAACCCU.................... len:22 al:2
.................................................UUCUUUGCACUGUUCgAACCCUG................... len:23 al:3
.................................................UUCUUUGCACUGUUCAAACCuU.................... len:22 al:20
.................................................UUCUUUGCACUGUUCgAACC...................... len:20 al:3
.................................................UUCUUUGCACUGUUCAAgCCCUGC.................. len:24 al:3
.................................................UUCUUUGCACUaUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCCUG................... len:23 al:214
.................................................UUCUUcGCACUGUUCAAACCC..................... len:21 al:5
.................................................UUCUUUGCACUGUUCAAACCC..................... len:21 al:603
.................................................UUCUUUGCACUGUUCAAACCCa.................... len:22 al:360
.................................................UUCUUUGCACUGUUCAAACCCUGC.................. len:24 al:517
.................................................UUCcUUGCACUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAAuCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCuUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAAuCCU.................... len:22 al:2
.................................................UUCUUUGCACUGcUCAAACCCUG................... len:23 al:2
.................................................UUCUUUGCACUGUUCAAACCCUu................... len:23 al:174
.................................................UUCUcUGCACUGUUCAAACCCU.................... len:22 al:7
.................................................UUCUUUGCcCUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCUaC.................. len:24 al:2
.................................................UUCaUUGCACUGUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCCUc................... len:23 al:13
.................................................UUCUUUGCACUGUcCAAACCC..................... len:21 al:2
.................................................UUCUaUGCACUGUUCAAACCCU.................... len:22 al:2
.................................................UUCUUUGCACUGUUCcAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACcGUUCAAACCC..................... len:21 al:1
.................................................UUCUUUGCACcGUUCAAACCCU.................... len:22 al:7
.................................................cUCUUUGCACUGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUgGCACUGUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACuCU.................... len:22 al:2
.................................................UUCUUUGCACUGUUCAAACCCUGg.................. len:24 al:9
.................................................UUCUUUGCACUGUUCuAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCu..................... len:21 al:136
.................................................UUCcUUGCACUGUUCAAACCCU.................... len:22 al:15
.................................................UUCUUUGCACUGUUCAAACCCUGCC................. len:25 al:13
.................................................UUCUUUGCACUGcUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCACUGUUCAcACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCCc.................... len:22 al:351
.................................................UcCUUUGCACUGUUCAAACCCU.................... len:22 al:9
.................................................UUCUUUGCcCUGUUCAAACC...................... len:20 al:1
.................................................UUCgUUGCACUGUUCAAACCC..................... len:21 al:2
.................................................cUCUUUGCACUGUUCAAACC...................... len:20 al:1
.................................................UUCUUUGCuCUGUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCCg.................... len:22 al:74
.................................................UUCUUUGCACUGcUCAAACCCU.................... len:22 al:4
.................................................UUCUUUGCACUGUUCAAcCCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUuUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACcGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAgACCCU.................... len:22 al:9
.................................................UUCUUUGCACUGUUCAgACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUuAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACCa..................... len:21 al:76
.................................................UUCUUUGCACUGUUCAAgCCCU.................... len:22 al:7
.................................................UUCUUUaCACUGUUCAAACCCU.................... len:22 al:3
.................................................UUCUUUGCACUGUUCAAACu...................... len:20 al:24
.................................................UUCUUUGCACUGUUCAAACCCUGCa................. len:25 al:19
.................................................UUCUUUGCACUGUUCAAACCCaGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGCu................. len:25 al:60
.................................................UUCUUUGCACUGUUCAAACaCUG................... len:23 al:3
.................................................UUCUUUGCACUGUcCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGuC................. len:25 al:4
.................................................UUCUUUGCACUGUUCAAACuC..................... len:21 al:4
.................................................UUCUUUGCACUGUUCAAcCCCU.................... len:22 al:2
.................................................UUCUUUGCACUaUUCAAACCCUG................... len:23 al:1
.................................................UUCUUUGCACUGUUCAAACCCUuC.................. len:24 al:8
.................................................UUCUUUGuACUGUUCAAACCCU.................... len:22 al:3
.................................................UUCUUUGCACUGUUCAAACC...................... len:20 al:195
.................................................UUCUUUGCACUGUUuAAACCCUG................... len:23 al:1
.................................................UUCUUUGCACUGUUCAAcCCC..................... len:21 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGu.................. len:24 al:891
.................................................UUCUUUGCACUGUUCAAACCCcGC.................. len:24 al:1
.................................................UUCUUcGCACUGUUCAAACCCU.................... len:22 al:15
.................................................UUCUUUGuACUGUUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCACUGUUCAAACCCUGCuC................ len:26 al:2
.................................................UUCUUUGCACUGcUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACa...................... len:20 al:16
.................................................UUCUUUGCACUGUUCAAACCaU.................... len:22 al:7
.................................................UUCUUUGCACUGUUCAAACaCU.................... len:22 al:4
.................................................UcCUUUGCACUGUUCAAACCC..................... len:21 al:1
.................................................UUCUUUGCACUGUUCAAuCCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCgAACCCU.................... len:22 al:11
.................................................UUCUcUGCACUGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACCCU.................... len:22 al:2941
.................................................UUCUUUGCACUGUcCAAACCCUG................... len:23 al:1
.................................................UUCUcUGCACUGUUCAAACCCUG................... len:23 al:2
.................................................UUCUUUGCACUGUcCAAACCCU.................... len:22 al:6
.................................................UUuUUUGCACUGUUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCACaGUUCAAACCC..................... len:21 al:1
.................................................UUCUUUGCACUGUUCAAAC....................... len:19 al:28
.................................................UUCUUUGCAuUGUUCAAACCCU.................... len:22 al:4
.................................................UcCUUUGCACUGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAA........................ len:18 al:1
.................................................UUCUUUGCACUGUUCAgACCC..................... len:21 al:4
.................................................UUCUUUGCACUGUUCAAACCCgGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCcG................... len:23 al:3
.................................................UUCUUUGCACUGUUCAAACCCUa................... len:23 al:84
.................................................UUCUUUGCACUGUUCAAACCgU.................... len:22 al:1
.................................................UUCUUUGCAuUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCgCUGUUCAAACCC..................... len:21 al:2
..................................................UCUUUGCACUGUUCAAACCCUGC.................. len:23 al:15
..................................................UCUUUGCACUGUUCAAACCCUGCu................. len:24 al:5
..................................................UCUUUGCACUGUUCAAACCC..................... len:20 al:4
..................................................UCUUUGCACUGUUCAAACCCUGCa................. len:24 al:1
..................................................cCUUUGCACUGUUCAAACCC..................... len:20 al:1
..................................................UCUUUGCACUGUUCAAACu...................... len:19 al:1
..................................................UCUUUGCACUGUUCAAACCCUG................... len:22 al:2
..................................................UCUUUGCACUGUUCAAACCCUa................... len:22 al:2
..................................................UCUUUGCACUGUUCAAACC...................... len:19 al:1
..................................................UCUUUGCACUGUUCAAACCCa.................... len:21 al:4
..................................................UCUUUGCACUGUUCAAACCCUGu.................. len:23 al:20
..................................................UCUUUGCACUGUUCAAACCCUGCuC................ len:25 al:1
..................................................UCUUUGCACUGUUCAAACCCc.................... len:21 al:4
..................................................UCUUUGCACUGUUCAAACCCUGa.................. len:23 al:2
..................................................UCUUUGCACUGUUCAAACCCU.................... len:21 al:25
..................................................UCUUUGCACUGUUCAAACuC..................... len:20 al:1
..................................................UCUUUGCACUGUUCAAACCCUu................... len:22 al:1
...................................................CUUUGCACUGUUCAAACCCUGC.................. len:22 al:10
...................................................CUUUGCACUGUUCAAACCCUGCCa................ len:24 al:1
...................................................CUUUGCACUGUUCAAACCCU.................... len:20 al:246
...................................................CUUcGCACUGUUCAAACCCUG................... len:21 al:1
...................................................CUUUGCACUGUUCAAACCa..................... len:19 al:22
...................................................CUUUGCACUGUUCAAACCCUGu.................. len:22 al:22
...................................................CUUUGCACUGUUuAAACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAACCCc.................... len:20 al:37
...................................................CUUUGCACUGUUCAAACCCg.................... len:20 al:10
...................................................CUUUGCACUGUUCAAACu...................... len:18 al:5
...................................................CUUUGCACUGUUCAAACCCUa................... len:21 al:9
...................................................CUUUGCACcGUUCAAACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCgAACCCU.................... len:20 al:2
...................................................CUUUGCACUGUUCAAACC...................... len:18 al:31
...................................................CUUUGCACUGUUCAAcCCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAACCCa.................... len:20 al:31
...................................................CUUUGCACUGUUCAAACg...................... len:18 al:1
...................................................CUUUGCACUGUUCAAACCCUG................... len:21 al:19
...................................................CUUUGCACUGUUCAAACCC..................... len:19 al:14
...................................................CUUUGCACcGUUCAAACC...................... len:18 al:1
...................................................CUUUGCACUGUUCAcACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAgCCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCcAACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAACCCcG................... len:21 al:1
...................................................CUUUGCACUGUcCAAACCCU.................... len:20 al:2
...................................................CcUUGCACUGUUCAAACCCU.................... len:20 al:2
...................................................uUUUGCACUGUUCAAACCCU.................... len:20 al:1
...................................................CUcUGCACUGUUCAAACCCU.................... len:20 al:4
...................................................CUUUGCACUGUUCAAACCu..................... len:19 al:2
...................................................CUUUGCACUGUUCAAACa...................... len:18 al:7
...................................................CUUUGCACUGUUCAAACCCUu................... len:21 al:9
....................................................UUUGCACUGUUCAAACCCUGu.................. len:21 al:2
....................................................UUUGCACUGUUCAAACCCUGCC................. len:22 al:1
....................................................UUUGCACUGUUCAAACCCUGCu................. len:22 al:5
....................................................UUUGCACUGUUCAAACCCU.................... len:19 al:11
....................................................UUUGCACUGUUCAAACCCUGC.................. len:21 al:1
.....................................................UUGCACUGUcCAAACCCU.................... len:18 al:1
.....................................................UUGCACUGUUCAAACCCUGC.................. len:20 al:7
.....................................................UUGCACUGUUCAAACCCUGCC................. len:21 al:1
.....................................................UUGCACUGUUCAAACCCUGCu................. len:21 al:6
.....................................................UUGCACUGUUCAAACCCUa................... len:19 al:5
.....................................................UUGCACUGUUCAAACCCUG................... len:19 al:45
.....................................................UUGCACUGUUCAAACCCUGuC................. len:21 al:1
.....................................................UUGCACUGUUCAAACCCUGu.................. len:20 al:11
.....................................................UUGCACUGUUCAAACCCUGa.................. len:20 al:1
.....................................................UUGCACcGUUCAAACCCUG................... len:19 al:1
.....................................................UUGCACUGUUCAAACCCc.................... len:18 al:5
.....................................................UUGCACUGUUCAAACCCU.................... len:18 al:15
.....................................................UUGCACUGUUCAAACCCa.................... len:18 al:1
.....................................................UUGCACUGUUCAAACCCUu................... len:19 al:1
......................................................UGCACUGUUCAAACCCUG................... len:18 al:2
.......................................................GCACUGUUCAAACCCUGu.................. len:18 al:2
.......................................................GCACUGUUCAAACCCUGC.................. len:18 al:1