Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam Location: ptg000016l:8599833-8599925 minus PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_9380.ps.pdf Locus Name: Cluster_9380 AUUAUCUUGAGGUGAAAGAUCAUGGCAGCUAUGAACAUCACUUUUGAGCAGUAAUGUUCGCAACUGCCUUGUUUUUUCUACCUUAACUUGCUU ......(((((((((((((.((.(((((...(((((((.(((.......))).)))))))...))))).)).)))))).)))))))....... (-30.70) .UUAUCUUGAGGUGAAAGA.......................................................................... len:18 al:2 ...................UCAUGGCAGCcAUGAACAUCACU................................................... len:23 al:5 ...................UCAUGGCAGCUAUGAACA........................................................ len:18 al:19 ...................UCAUGGCAGCUAcGAACAUCACU................................................... len:23 al:13 ...................UCAUGGCAGCUAUaAACAUCACUU.................................................. len:24 al:1 ...................UCgUGGCAGCUAUGAACAUCACU................................................... len:23 al:11 ...................UCAUGGCAGaUAUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGuUAUGAACAUCACU................................................... len:23 al:7 ...................UCAUGGCAGCUgUGAACAUCACU................................................... len:23 al:21 ...................UCAUGGCAGCUcUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAUGAACg........................................................ len:18 al:1 ...................UCAUGGCAGCUAUGAACgUCACU................................................... len:23 al:6 ...................UCAUGGCAGCaAUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAUGAACAUCACg................................................... len:23 al:35 ...................UCAUGGCuGCUAUGAACAUCACU................................................... len:23 al:5 ...................UCAUGGCAaCUAUGAACAUCACU................................................... len:23 al:4 ...................UCAUGGCAGCUAUGgACAUCACU................................................... len:23 al:20 ...................UCAUGGCAGCUAUGAACAUCuCU................................................... len:23 al:1 ...................UCAUGGCAGCUAUGAgCAUCACU................................................... len:23 al:29 ...................UCAUGGCAGCUAUGAACAU....................................................... len:19 al:13 ...................UCuUGGCAGCUAUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAaGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAUGAACAUCACaUU................................................. len:25 al:8 ...................UCAUaGCAGCUAUGAACAUCACU................................................... len:23 al:3 ...................UCAUGGCAGCUAUGAACAUCAuU................................................... len:23 al:6 ...................UCAUGaCAGCUAUGAACAUC...................................................... len:20 al:1 ...................UCAUGGCAGCUAUGAACAUCg..................................................... len:21 al:1 ...................UCAUGGCAGCUAUGAACAUCAa.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGAACgUCAC.................................................... len:22 al:2 ...................UCAUGGCAGCUAUGAACAUu...................................................... len:20 al:5 ...................UCAUGGCAGCUAUGAACAUC...................................................... len:20 al:89 ...................UCAUGGCAGCUAUGAACAcCA..................................................... len:21 al:1 ...................UCAUGGCAGCUgUGAACAUCACUUU................................................. len:25 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUUUGAGu............................................ len:30 al:4 ...................UCAUGGCAGCUAUGAACAUCACcU.................................................. len:24 al:1 ...................UCAUGGCAGCUAUuAACAUCACU................................................... len:23 al:3 ...................UCAUGGCgGCUAUGAACAUCAC.................................................... len:22 al:1 ...................UCAUGaCAGCUAUGAACAUCACU................................................... len:23 al:4 ...................UCAUGGCAGCUAUGAACAUCAaU................................................... len:23 al:2 ...................UCAUGGCAGCUAUGAACAUCACUUUUGAGCA........................................... len:31 al:1 ...................UCAUGGCAGCUAUGAACAcC...................................................... len:20 al:1 ...................UCAUGGCAGCUAUGAACAUCgCU................................................... len:23 al:11 ...................UCAUGGCAGCUAUGAAuA........................................................ len:18 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUc................................................. len:25 al:1 ...................UCAUGGCAGCUAUGAACAUCgC.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGgACAUCAC.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUU................................................. len:25 al:11 ...................cCAUGGCAGCUAUGAACAUCACU................................................... len:23 al:17 ...................UCAUGGCAGCUAUGAACAUCACc................................................... len:23 al:346 ...................UCAUGGCAGCUAUGcACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAUaAACAUCACU................................................... len:23 al:2 ...................UCuUGGCAGCUAUGAACAUCACUUUUGAGC............................................ len:30 al:1 ...................UCAUGGCAGCUAUGAACAUCACaU.................................................. len:24 al:23 ...................UCAUGGCAGCUAUGAACAUCACUc.................................................. len:24 al:5 ...................UCAUGGCAGCUAcGAACAUCAC.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGAAuAUCACU................................................... len:23 al:3 ...................cCAUGGCAGCUAUGAACAUCACUUUU................................................ len:26 al:1 ...................UCAUGGCAGCUAUGAACAcCAC.................................................... len:22 al:1 ...................aCAUGGCAGCUAUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUUUu............................................... len:27 al:2 ...................UCAUGGCAGCUAUGAACAUCACUUUUG............................................... len:27 al:2 ...................UCAUGGCAGCUAUGAACAUCu..................................................... len:21 al:6 ...................UCAUuGCAGCUAUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCAGCUAUGAAuAUCACUU.................................................. len:24 al:2 ...................UCAUGGCAGCUAUGAACAUCACUUUU................................................ len:26 al:4 ...................UCAUaGCAGCUAUGAACAUCAC.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGAACAgCACU................................................... len:23 al:1 ...................UCAaGGCAGCUAUGAACAUCACU................................................... len:23 al:1 ...................UCAUaGCAGCUAUGAACAUCACUUUUGAGC............................................ len:30 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUUUGAGC............................................ len:30 al:23 ...................UCAcGGCAGCUAUGAACAUCACUUUUGAGC............................................ len:30 al:1 ...................UCAUGGCAGCUAUGAACAUCACU................................................... len:23 al:4410 ...................UCAUGGCgGCUAUGAACAUCA..................................................... len:21 al:1 ...................UuAUGGCAGCUAUGAACAUCACU................................................... len:23 al:5 ...................UCAUGGCAGCUAUGAACAUCACUaU................................................. len:25 al:15 ...................UCAUGGCAGCUAUGAACAUCAuUU.................................................. len:24 al:1 ...................UCcUGGCAGCUAUGAACAUCACU................................................... len:23 al:2 ...................UCAUGGCAGCUAUGAgCAUCA..................................................... len:21 al:1 ...................UCAUGGCAGCUcUGAACAUCAC.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGAACAUCACa................................................... len:23 al:249 ...................UCAUGGCAGCUAUGAACAgCA..................................................... len:21 al:1 ...................UCAUGGCAGCUAUGAACAUCACUaUU................................................ len:26 al:2 ...................UCAUGGCAGCUAUGAACAUCACUU.................................................. len:24 al:41 ...................UCAUGGCAGCUAUGAACAUuA..................................................... len:21 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUa................................................. len:25 al:5 ...................UCAUGGCcGCUAUGAACAUCACU................................................... len:23 al:3 ...................UCcUGGCAGCUAUGAACAUCAC.................................................... len:22 al:1 ...................UCAUGGCAGCUAUGgACAUC...................................................... len:20 al:1 ...................UCAUGGCAGCUAUGuACAUCACU................................................... len:23 al:4 ...................UCAUGGCAGCUAUGAACAUCACUa.................................................. len:24 al:111 ...................UCAUGGCgGCUAUGAACAUCACU................................................... len:23 al:20 ...................UCAUGGCAGCUAcGAACAUC...................................................... len:20 al:1 ...................UCAUGGCAGCUAUGAACAUCcCU................................................... len:23 al:4 ...................UCAgGGCAGCUAUGAACAUCACU................................................... len:23 al:1 ...................UCAUGGCgGCUAUGAACAUCACUUUUGAG............................................. len:29 al:1 ...................UCAUGGCAGCUAUGAACAUCA..................................................... len:21 al:119 ...................cCAUGGCAGCUAUGAACAUCACUU.................................................. len:24 al:1 ...................UCAUGGCAGCUAUGAACAUCACUUaU................................................ len:26 al:1 ...................UCAUGGCAGCUAUGAgCAUCAC.................................................... len:22 al:3 ...................UCAUGGCAGCUAUGAACAcCACU................................................... len:23 al:21 ...................UCAcGGCAGCUAUGAACAUCACU................................................... len:23 al:7 ...................UCAUGGCAGCUAUGAACAUCAu.................................................... len:22 al:17 ...................UCAUGGCAGCUAUGAACAUCAC.................................................... len:22 al:283 ...................UCAUGGuAGCUAUGAACAUCACU................................................... len:23 al:5 ...................UCAUGGCAGCUAUGAACAUuACU................................................... len:23 al:1 ....................CAUGGCAGCUAUGAAC......................................................... len:16 al:1 ....................CuUGGCAGCUAUGAACAUCACU................................................... len:22 al:4 ....................uAUGGCAGCUAUGAACAUCACU................................................... len:22 al:3 ....................CAUGGCAGCUAUGAACAUCACc................................................... len:22 al:661 ....................CAUGGCAGCUAUGAACAUCAuU................................................... len:22 al:11 ....................CAUGGCAGCUAUGAACAUCACUc.................................................. len:23 al:3 ....................CAUGGCAGCUAUGAACAUCuCU................................................... len:22 al:3 ....................CAUGGCAGCUAUGAACAUCACUgU................................................. len:24 al:1 ....................CAUGGCAGCUAUGAACAUCAC.................................................... len:21 al:541 ....................CAUGGCAaCUAUGAACAUCACU................................................... len:22 al:5 ....................CgUGGCAGCUAUGAACAUCACU................................................... len:22 al:25 ....................CAUGGCAGCUAUGAACAUCgC.................................................... len:21 al:4 ....................CAgGGCAGCUAUGAACAUCACU................................................... len:22 al:1 ....................CAUaGCAGCUAUGAACAUCACU................................................... len:22 al:5 ....................CAUGGCAGCUAgGAACAUCACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGAACAUCACUUc................................................. len:24 al:1 ....................CAUGGCAGCUAUGAA.......................................................... len:15 al:1 ....................CAUGGCAGCUAUGAuCAUCA..................................................... len:20 al:1 ....................CAUGGCAGCUAcGAACAUCAC.................................................... len:21 al:4 ....................CAUGGCAGCUAUGAACAc....................................................... len:18 al:2 ....................CAUGGuAGCUAUGAACAUC...................................................... len:19 al:2 ....................CAUGGCAGCUAUGAAuAUCACU................................................... len:22 al:5 ....................CAUGGCAGuUAUGAACAUCA..................................................... len:20 al:1 ....................CcUGGCAGCUAUGAACAUCACU................................................... len:22 al:4 ....................CAUGGCAGCUAUGAACgUCA..................................................... len:20 al:1 ....................gAUGGCAGCUAUGAACAUCAC.................................................... len:21 al:2 ....................CAUGGCAGCUAUGAACAUCACUUUUa............................................... len:26 al:1 ....................CAUGGCAGCUAUGgACAUCACU................................................... len:22 al:37 ....................CAaGGCAGCUAUGAACAUCACU................................................... len:22 al:2 ....................CAUGGCAGCUAUGAACAUCcC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACgUCACUUU................................................. len:24 al:1 ....................CgUGGCAGCUAUGAACAUCAC.................................................... len:21 al:2 ....................CAUGGCAGCUAUGAgCAUCACU................................................... len:22 al:27 ....................CAUGGCAGCUAUGgACAUC...................................................... len:19 al:1 ....................CAUGGCAGCUAUGAuCAUCACU................................................... len:22 al:2 ....................CAUGGCAGuUAUGAACAUCACU................................................... len:22 al:2 ....................CAUGGCAGCUAUGAcCAUCACU................................................... len:22 al:5 ....................CAUGGCAGCUAUGAACAUCACUcU................................................. len:24 al:1 ....................CAUGGCAGCUAUaAACAUCACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGgACAUCA..................................................... len:20 al:1 ....................CAUGGCAGCUAUGAACAUaACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGAACAUCAgU................................................... len:22 al:3 ....................uAUGGCAGCUAUGAACAUCA..................................................... len:20 al:1 ....................CAUGGCAGCUAUGAACgUCAC.................................................... len:21 al:6 ....................CAUGGCuGCUAUGAACAUCACU................................................... len:22 al:4 ....................CAUGGCAGCUAUGAACAUCAaU................................................... len:22 al:3 ....................CAUGGCAGCUAUGAACAUCACUaU................................................. len:24 al:3 ....................CAUGGCAGCUAUGAACAUa...................................................... len:19 al:3 ....................CAUGGuAGCUAUGAACAUCAC.................................................... len:21 al:2 ....................gAUGGCAGCUAUGAACAUCACU................................................... len:22 al:2 ....................CAUGGCAGCUgUGAACAUCAC.................................................... len:21 al:2 ....................CAUGGCAGCUAUGAgCAU....................................................... len:18 al:1 ....................CAUGGCAGCUAUGcACAUCAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACAUCACUUUUGAGC............................................ len:29 al:3 ....................CAUGGCAGCUAUGAACAUCACUUUU................................................ len:25 al:2 ....................CgUGGCAGCUAUGAACAUCA..................................................... len:20 al:1 ....................CAUGGCAGCUAUGAACA........................................................ len:17 al:3 ....................CAUGGCAGCUAUGAACAUCu..................................................... len:20 al:3 ....................CAUGGCAGCUAUGAACAUCACa................................................... len:22 al:364 ....................CAUGGCAGCUAUGuACAUCACU................................................... len:22 al:6 ....................CAUGGCAGCUAUGAACAUCAa.................................................... len:21 al:8 ....................CAUGGCAGCUAUGAACAUCAu.................................................... len:21 al:60 ....................CAUGGCAGgUAUGAACAUCACU................................................... len:22 al:2 ....................CAUGGCAGCUAUGAACAUCACUUa................................................. len:24 al:3 ....................CAUGGCAGCUAUGAACAcCAC.................................................... len:21 al:5 ....................CAcGGCAGCUAUGAACAUCACU................................................... len:22 al:13 ....................CAUGuCAGCUAUGAACAUCACU................................................... len:22 al:2 ....................CAUGaCAGCUAUGAACAUCACU................................................... len:22 al:9 ....................CAUGGCAGCUAUGAACAUCACUUUc................................................ len:25 al:1 ....................CAUGGCAGCUAUGAACAUC...................................................... len:19 al:221 ....................CAUGGCAGCUAUGAACgUC...................................................... len:19 al:1 ....................CAUGGCAGCUAUGAACAUCACU................................................... len:22 al:7268 ....................CAUGGCAGCUAUGAACAUCcCU................................................... len:22 al:7 ....................CAcGGCAGCUAUGAACAUCAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACAU....................................................... len:18 al:66 ....................CAUGGCAGCUAUGAACAUCA..................................................... len:20 al:110 ....................CAUGGCAaCUAUGAACAUCAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGcACAUCACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGAACAUCACUUUUGAGCAG.......................................... len:31 al:2 ....................CAUGGCAGCUAUGAACAa....................................................... len:18 al:2 ....................CAUGGCAGgUAUGAACAUC...................................................... len:19 al:1 ....................CAUGGCAGCcAUGAACAUCAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACAUuACU................................................... len:22 al:3 ....................CAUGGCAGCUAUGAACcUCACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGgACAUCACUUU................................................. len:24 al:1 ....................CAUGGCAGCUAUGAACAUCACUUUUGAG............................................. len:28 al:1 ....................CAUGGCAuCUAUGAACAUCACU................................................... len:22 al:1 ....................CAUGGCAGCUgUGAACAUCACU................................................... len:22 al:51 ....................CAUGGCAGCUAUGAACgUCACU................................................... len:22 al:16 ....................CAUGGCAGCUAcGAACAUCA..................................................... len:20 al:2 ....................CAUGGCAGCUAUGAgCAUCAC.................................................... len:21 al:3 ....................CgUGGCAGCUAUGAACAUC...................................................... len:19 al:1 ....................CAUGGCAGCUAaGAACAUCACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGAACAUCACUUU................................................. len:24 al:11 ....................CAUGGCAGCUgUGAACAUCA..................................................... len:20 al:1 ....................CAUGGCAGCUuUGAACAUCACU................................................... len:22 al:1 ....................CAUGGCAGCUAUGAAgAUCACU................................................... len:22 al:1 ....................CAUGGuAGCUAUGAACAUCACU................................................... len:22 al:12 ....................CAUGGCgGCUAUGAACAUCAC.................................................... len:21 al:2 ....................CAUGGCAGCUAUuAACAUCACU................................................... len:22 al:1 ....................CuUGGCAGCUAUGAACAUCAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACAUCACUUUUGAGCA........................................... len:30 al:4 ....................CcUGGCAGCUAUGAACAUCAC.................................................... len:21 al:2 ....................CAUGGCAGCUAUGAACAUCACaU.................................................. len:23 al:5 ....................CAUGGCAGCUAUGAACAUu...................................................... len:19 al:6 ....................CAUuGCAGCUAUGAACAUCACU................................................... len:22 al:3 ....................CAUGGCAGCUAUGAACAUCgCU................................................... len:22 al:29 ....................CAUGGCAGCUAUGAAgAUCAC.................................................... len:21 al:1 ....................CAUGaCAGCUAUGAACAUC...................................................... len:19 al:1 ....................CAUGGCAGCUAUGAACAUCACg................................................... len:22 al:62 ....................CAUGGCAGCUAUGAACAUCACUU.................................................. len:23 al:29 ....................CAUGGCAGCUAUGAACAg....................................................... len:18 al:1 ....................CAUGGCAGCUAUGAcCAUCAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACAcCA..................................................... len:20 al:1 ....................CAUGGCAGCUAUGAACAcC...................................................... len:19 al:1 ....................CAUGGCAGCcAUGAACAUCACU................................................... len:22 al:19 ....................CAUGGCgGCUAUGAACAUCACU................................................... len:22 al:18 ....................CAUGGCAGCUcUGAACAUCACU................................................... len:22 al:5 ....................CAUGGCAGCUAcGAACAUCACU................................................... len:22 al:18 ....................CAUGGCAGCUAUGAACAcCACU................................................... len:22 al:31 ....................CAUGGCAGCUAUGAACAUaAC.................................................... len:21 al:1 ....................CAUGGCAGCUAUGAACAUCACUa.................................................. len:23 al:69 ....................CAUGGCcGCUAUGAACAUCACU................................................... len:22 al:6 .....................AUGGCAGCUAUGAACAUCACU................................................... len:21 al:1344 .....................AUGGCAGCUAUGAuCAUCACU................................................... len:21 al:1 .....................AUGGCgGCUAUGAACAUCACU................................................... len:21 al:5 .....................AUGGCAGCUAUGAACAUCACUUUc................................................ len:24 al:1 .....................AcGGCAGCUAUGAACAUCAC.................................................... len:20 al:1 .....................AUGGCAGCUAUGAgCAUCACU................................................... len:21 al:5 .....................AUGGCAGCUAUGAACAUCACUgU................................................. len:23 al:1 .....................AUGGCAGCUAaGAACAUC...................................................... len:18 al:1 .....................uUGGCAGCUAUGAACAUCACU................................................... len:21 al:2 .....................AUGaCAGCUAUGAACAUCACU................................................... len:21 al:4 .....................AUGGCAGCUAUGAAuAUCA..................................................... len:19 al:1 .....................AUGGCAGCUAUGAACAcCACU................................................... len:21 al:8 .....................AUGGCAGCUAUGgACAUCAC.................................................... len:20 al:1 .....................AUGGCAGCUAUGAACAUCACg................................................... len:21 al:10 .....................AUGGCAGCUAUGAACAUCACUUU................................................. len:23 al:12 .....................AUGGCAGCUAUGgACAUCACU................................................... len:21 al:7 .....................cUGGCAGCUAUGAACAUCACU................................................... len:21 al:3 .....................AUGGCAGCUAUGAACAUCgCU................................................... len:21 al:8 .....................AUGGCAaCUAUGAACAUCACUU.................................................. len:22 al:1 .....................AUGGCAGCUAUGAACAUCACUaUU................................................ len:24 al:2 .....................AUGGCAGCcAUGAACAUCACU................................................... len:21 al:1 .....................AUGGCAGCUAUGAACAUCACUUaU................................................ len:24 al:1 .....................AUGGuAGCUAUGAACAUCACU................................................... len:21 al:1 .....................AcGGCAGCUAUGAACAUCA..................................................... len:19 al:1 .....................AUGGCAGCUAUGAACAUCu..................................................... len:19 al:3 .....................AUGGCAGCUAUGAACAUCgCUU.................................................. len:22 al:1 .....................AUGGCAGCUAUGAACAUCACa................................................... len:21 al:100 .....................AUGGCAGCUAUGAACAUCACc................................................... len:21 al:84 .....................AUGGCAGCUAUGAACAUCAu.................................................... len:20 al:5 .....................AcGGCAGCUAUGAACAUCACU................................................... len:21 al:1 .....................AUGGCAaCUAUGAACAUCACU................................................... len:21 al:2 .....................AUGGCAGCUAUGuACAUCACU................................................... len:21 al:1 .....................AUGGCAGCUAUGAACAUa...................................................... len:18 al:2 .....................AUGGCAGCaAUGAACAUCACU................................................... len:21 al:2 .....................AUGGCAGCUAUGAACAUCAC.................................................... len:20 al:100 .....................AUGGCAGCUAUGAACAUCACUc.................................................. len:22 al:2 .....................AUGGCcGCUAUGAACAUCACU................................................... len:21 al:1 .....................AUGGCAGCUAUGAACAUCACUUUU................................................ len:24 al:2 .....................AUGGCAGCUAcGAACAUCACU................................................... len:21 al:4 .....................AUGGCAGCUAUGAACAUC...................................................... len:18 al:19 .....................AUGGCAGCUAUGAACAUCAa.................................................... len:20 al:1 .....................AUGGCAGCUAUGAACAUCA..................................................... len:19 al:27 .....................AUGGCAGCUAUGAAuAUCACU................................................... len:21 al:2 .....................AUGGCAGCUAUGAACAcC...................................................... len:18 al:1 .....................AUGGCAGCUAUGAACAUCAuU................................................... len:21 al:2 .....................AUGGCAGCUAUGAACAUCAaU................................................... len:21 al:1 .....................AUGGCAGCUAcGAACAUCAC.................................................... len:20 al:3 .....................AUGGCcGCUAUGAACAUCAC.................................................... len:20 al:1 .....................AUGGCAGCUgUGAACAUCACU................................................... len:21 al:7 .....................AUGGCAGCgAUGAACAUCACU................................................... len:21 al:1 .....................AUGGCAGCUAUGAACAUCACUUa................................................. len:23 al:3 .....................AUGGCAGCUAUGAACA........................................................ len:16 al:1 .....................AUGGCAGCUAUGAACAUCACUa.................................................. len:22 al:34 .....................gUGGCAGCUAUGAACAUCACU................................................... len:21 al:3 .....................AUGGCAGCUAUGAACAUCACaU.................................................. len:22 al:2 .....................AUGGCAuCUAUGAACAUCACU................................................... len:21 al:1 .....................AUGGCAGCUAUGAACgUCACU................................................... len:21 al:3 .....................AUGGCAGCUAUGAACAUCACUU.................................................. len:22 al:17 ......................UaGCAGCUAUGAACAUCACU................................................... len:20 al:1 ......................UGGCAaCUAUGAACAUCACU................................................... len:20 al:1 ......................UGGCAGCUAUGAACAUC...................................................... len:17 al:1 ......................UGGCAGCUAUGAgCAUCACU................................................... len:20 al:1 ......................UGGCAGCUgUGAACAUCACU................................................... len:20 al:1 ......................UGGCAGCUAUGAACAUCACUU.................................................. len:21 al:15 ......................UGGCAGCUgUGAACAUCACUU.................................................. len:21 al:1 ......................UGGCAGCUAUGAACcUCACU................................................... len:20 al:1 ......................UGGCAGCUAUGAACAUCACUUUUGAGCAGU......................................... len:30 al:5 ......................UGGCAGCUAUGAACAUCAC.................................................... len:19 al:8 ......................UGGCAGCUAcGAACAUCACU................................................... len:20 al:2 ......................UGGCAGCUAUGAACAUCACUUUU................................................ len:23 al:3 ......................UGGCAGCUAUGAACAUCAuU................................................... len:20 al:1 ......................UGGCAGCUAUGAACAUCACUc.................................................. len:21 al:2 ......................UGGCAGCUAUGAACAUCACa................................................... len:20 al:11 ......................UaGCAGCUAUGAACAUCACUUU................................................. len:22 al:1 ......................UGGCAGCcAUGAACAUCACU................................................... len:20 al:2 ......................UGGCAGCUAUGAACAUCACUUU................................................. len:22 al:1 ......................UGGCAGCUAUGAACAUCACUa.................................................. len:21 al:3 ......................UGGCAGCUAUGAACAUCAu.................................................... len:19 al:1 ......................UGGCAGCUAUGAACAcCACU................................................... len:20 al:1 ......................UGGCAGCUAUGAACAUCACU................................................... len:20 al:150 ......................UGGCAGCUAUGAACAUCgCU................................................... len:20 al:1 ......................UGGCAGCUAUGAACAUCACc................................................... len:20 al:18 ......................UGGCAGCUAUGAACAUCACUUUUG............................................... len:24 al:1 ......................UGGCAGCUAUGAACAUCACUUUUGAGu............................................ len:27 al:1 ......................UGGCAGCUAUGAACAUCACUUUUGAGC............................................ len:27 al:2 ......................UGGCAGCUAUGAACAUCA..................................................... len:18 al:1 .......................GGCAGCUAUGAACAUCACU................................................... len:19 al:6 .................................................AGUAAUGUUCGCAACUGCCUcG...................... len:22 al:1 .................................................AGUAAUGUUCGCAACUGCCUUG...................... len:22 al:1 .................................................AaUAAUGUUCGCAACUGCCUUGUU.................... len:24 al:3 .................................................AGUAAUGUUCGCAACUGCCUUa...................... len:22 al:1 ..................................................GUAAUGUUCGCAACUGCCUUu...................... len:21 al:1 ..................................................GUAAUGUUCGCAACUGCCUUGU..................... len:22 al:4 ..................................................cUAAUGUUCGCAACUGCCUUGUU.................... len:23 al:1 ..................................................cUAAUGUUCGCAACUGCCUUGU..................... len:22 al:1 ..................................................aUAAUGUUCGCAACUGCCUUGUU.................... len:23 al:2 ...................................................UAAUGUUuGCAACUGCCU........................ len:18 al:1 ...................................................UAAUGUUCGCAACaGCCUUGUUUU.................. len:24 al:3 ...................................................UAAUGUUCGCgACUGCCUUGU..................... len:21 al:9 ...................................................UAAUGUUCGCAACUGCCUUGUUUUaU................ len:26 al:4 ...................................................UAAUGUUCGCAACUGCCUcGUUUU.................. len:24 al:5 ...................................................UAAUGUUCGCAACUGCCUUGUUUUUUuU.............. len:28 al:1 ...................................................UAAUGUUaGCAACUGCCUUGUU.................... len:22 al:2 ...................................................UgAUGUUCGCAACUGCCUUGU..................... len:21 al:5 ...................................................UAAUGUUCGCAACUGCCUUa...................... len:20 al:32 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