Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000018l:2286780-2286870 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/strucVis/Cluster_9335.ps.pdf
Locus Name: Cluster_9335
AUUUCAAUUAGCUAGGUCAGUGUUUGAACAGUCCAAGUAGCAGUUAUUGUUCUUUGCACUGUUCAAACCCUGCCCUACCUAGCCAUUUGGG
...((((...((((((((((.(((((((((((.((((.((((.....)))).)))).))))))))))).)))....)))))))...)))). (-35.30)
.UUUCAAUUAGCUAGGUCA........................................................................ len:18 al:1
.UUUCAAUUAGCUAGGUCAG....................................................................... len:19 al:1
..UUCAAUUAGCUAGGUCAGU...................................................................... len:19 al:3
.....AAUUAGCUAGGUCAGUGUUUGAACAGU........................................................... len:27 al:1
.........AGCUAGGUCAGUGUUUGAACA............................................................. len:21 al:1
................UCAGUGUUUGAACAGUCCAAGUAGCAGc............................................... len:28 al:1
..................AGUGUUUGAACAGUCCAAGU..................................................... len:20 al:1
..................AGUGUUUGAACAGUCCAAGUAGg.................................................. len:23 al:1
..................AGUGUUUGAgCAGUCCAAGUAGC.................................................. len:23 al:1
..................AGUGUUUGAACAGUCCAAGUAGCA................................................. len:24 al:9
..................AGUGUUUGAACAGUCCAAGUAGC.................................................. len:23 al:10
..................AGUGUUUGAACAGUCCAAGUAGCAuU............................................... len:26 al:1
...................GUGUUUGAACAGUCCAAGUAGCA................................................. len:23 al:10
...................GUGUUUGAACAGUCCAAGUAGCAGUU.............................................. len:26 al:1
...................GgGUUUGAACAGUCCAAGUAGC.................................................. len:22 al:1
...................GUGUUUGAACAGUCCAAGUAG................................................... len:21 al:1
...................GUGUaUGAACAGUCCAAGUAGC.................................................. len:22 al:2
...................GUGUUUGAACAGUCCAAGUgGC.................................................. len:22 al:1
...................GUaUUUGAACAGUCCAAGUAGC.................................................. len:22 al:1
...................GUGUUUGAACAGUCCAAGU..................................................... len:19 al:1
...................GUGUUUGAACAGUCCAAGUAGC.................................................. len:22 al:20
...................GUGUUUGAACAGUCCAAGUA.................................................... len:20 al:2
...................GUGUUUGAACAGUCCAAGUAGa.................................................. len:22 al:1
...................GUGUUUGAACAGUCCAAGUAGu.................................................. len:22 al:5
...................GUGUUUGAACAGUCCAAGUAGCAGU............................................... len:25 al:2
....................UGUUUGAACgGUCCAAGUAGCA................................................. len:22 al:2
....................UGUUUGAACAGUCCAAGUAGCg................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGU..................................................... len:18 al:18
....................UGUUUGgACAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAgCAGUCCAAGU..................................................... len:18 al:1
....................UGUUUGAACAGUCCAuGU..................................................... len:18 al:1
....................UGUUUGAcCAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGC.................................................. len:21 al:140
....................UGUUUGgACAGUCCAAGUAGC.................................................. len:21 al:1
....................UGUcUGAACAGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAG................................................... len:20 al:4
....................UGUUUGAACAGUCCAAGUAGCc................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGc..................................................... len:18 al:1
....................UGUUUGAACAGUCCAAGUA.................................................... len:19 al:9
....................UGUUUGAACcGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAGCAu................................................ len:23 al:4
....................UGUUUGAACAGUCCuAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCgAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAGCAuUU.............................................. len:25 al:1
....................UGUUUGAACAGUCCAAGUAGCAG................................................ len:23 al:1
....................UGUUUGAACAGUCCAAGUAGCAGUUAUUGUU........................................ len:31 al:1
....................UGUUUGAACAGUuCAAGUAGCA................................................. len:22 al:1
....................UaUUUGAACAGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAGa.................................................. len:21 al:2
....................UGUUUGAACAGUCCAAGUAGCAGUUAUUG.......................................... len:29 al:1
....................UGUUUGAACAGcCCAAGUAGCAGUU.............................................. len:25 al:1
....................UGUUUGAACAGUCCAAGUAGCu................................................. len:22 al:10
....................UGUUUGAACAGUCCAAGUAaCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGu.................................................. len:21 al:14
....................UGUUUGAACAGUCCAAGUAGCAGU............................................... len:24 al:4
....................UGUUUGAAuAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACAGUCCAAGUAGCA................................................. len:22 al:116
....................UGUUUGAgCAGUCCAAGUAGC.................................................. len:21 al:3
....................UGUUUGAACAGUCCAAGcAGCA................................................. len:22 al:1
....................UGUUcGAACAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGuACAGUCCAAGUAGCA................................................. len:22 al:1
....................UGUUUGAACgGUCCAAGUAGC.................................................. len:21 al:1
....................UGUUUGAACAGUCCAAGUAGCAuU............................................... len:24 al:5
.....................GUUUGAACcGUCCAAGUAGC.................................................. len:20 al:1
.....................GUUUGAACAGUCCAAGUAGCAGUc.............................................. len:24 al:1
.....................GUUUGAACAGUCCAAGUAGCg................................................. len:21 al:2
.....................GUUUGAACAGUCCAAGUAGCAu................................................ len:22 al:1
.....................GUUUGAACAGUCCgAGUAGCAGU............................................... len:23 al:2
.....................GUUUGAACAGUCCAAGUAGuA................................................. len:21 al:1
.....................GUUUGAACAGUCCAAGUAGCAuU............................................... len:23 al:3
.....................GUUUGAACAGUCCAAGUAGu.................................................. len:20 al:4
.....................GUUUGAACAGUCCAAGUAGCu................................................. len:21 al:2
.....................GUUUGAACAGUCCAAGUAGC.................................................. len:20 al:13
.....................GUUUGAACAGUCCAAGUAGCA................................................. len:21 al:30
......................UUUGcACAGUCCAAGUAGCA................................................. len:20 al:1
......................UUUGAACAGUCCAAGUAGCAGUU.............................................. len:23 al:3
......................UUUGAACAGUCCAAGUAGu.................................................. len:19 al:4
......................UUUGAACAGUCCAAGUAGCAu................................................ len:21 al:1
......................UUUGAACAGUCCAAGUAGC.................................................. len:19 al:13
......................UUUGAACAGUCCAAGUAGCAGUUAUU........................................... len:26 al:1
......................UUUGAACAGUCCAAGUAGCAGUUAa............................................ len:25 al:1
......................UUUGAACAGUCCAAGUAGCA................................................. len:20 al:1
......................UUUGAACAGUCCAAGUAGCAGUUAUUGUU........................................ len:29 al:1
......................UUUGAACAGUCCAAGUAGCAG................................................ len:21 al:1
......................UUUGAACAGUCCAAGUAGCAGUUAc............................................ len:25 al:1
......................UUUGAACAGUCCAAGUAGCAGU............................................... len:22 al:4
.......................UUGAACAGUCCAAGUAGC.................................................. len:18 al:1
.......................UUGAACAGUCCAAGUAGCAGUU.............................................. len:22 al:2
.......................UUGAACAGUCCAAGUAGCAGU............................................... len:21 al:2
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCC..................... len:29 al:2
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCCUa................... len:31 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCCUG................... len:31 al:2
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCCU.................... len:30 al:6
.........................................AGUUAUUGUUCUUUGCACUGUUCAAgCCCU.................... len:30 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACu...................... len:28 al:3
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCu..................... len:29 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACC...................... len:28 al:6
.........................................AGUUAUUGUUCUUUGCACUGUUC........................... len:23 al:1
.........................................AGUUAUUGUUCUUUGCACUGUUCAAACCa..................... len:29 al:1
..........................................GUUAUUGUUCUUUGCACUGUUCAAACCCU.................... len:29 al:4
..........................................GUUAUUGUUCUUUGCACaGUUCAAACCCU.................... len:29 al:1
..........................................GUUAUUGUUCUUUGCACUGUUCAAACCCc.................... len:29 al:1
............................................cAUUGUUCUUUGCACUGUUCAAACCCU.................... len:27 al:1
..............................................UUGUUCUUUGCACUGUUCAAACCCUGu.................. len:27 al:1
................................................cUUCUUUGCACUGUUCAAACCCUGC.................. len:25 al:1
................................................GUUCUUUGCACUGUUCAAACCCUGC.................. len:25 al:1
................................................GUUCUUUGCACUGUUCAAACCCU.................... len:23 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGCu................. len:25 al:59
.................................................UUCUUcGCACUGUUCAAACCC..................... len:21 al:5
.................................................UUCUUUGCACUGUUCAAcCCC..................... len:21 al:1
.................................................UUCUUUGCACUaUUCAAACCCUG................... len:23 al:1
.................................................UUCUUUGCACUGUcCAAACCCUG................... len:23 al:1
.................................................UUCUUaGCACUGUUCAAACCCU.................... len:22 al:2
.................................................UUCUUUGCACUGUUCAAACCCUa................... len:23 al:81
.................................................UUCUUUGCACUGUUCAgACCCUGC.................. len:24 al:2
.................................................UUCUUUGCcCUGUUCAAACCCU.................... len:22 al:8
.................................................UUCaUUGCACUGUUCAAACCCU.................... len:22 al:1
.................................................UcCUUUGCACUGUUCAAACCC..................... len:21 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGu.................. len:24 al:840
.................................................UUCUUUGCACUGUUCAAcCCCU.................... len:22 al:2
.................................................cUCUUUGCACUGUUCAAACC...................... len:20 al:1
.................................................UUCUUUGCACUGUUCAgACCC..................... len:21 al:4
.................................................UUCUUUGCACUGUUCAAACCgU.................... len:22 al:1
.................................................cUCUUUGCACUGUUCAAACCCU.................... len:22 al:11
.................................................UUCUUUGCACUGUUCAAACCCaGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCg..................... len:21 al:6
.................................................UUCUUUGCACUGUUCAAACu...................... len:20 al:23
.................................................UUCUUUGCACUGUUuAAACCCUG................... len:23 al:1
.................................................UUCUUUGCACUGUUCAAACCCUG................... len:23 al:209
.................................................UUCUUUGCACUGcUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACCCUc................... len:23 al:13
.................................................UUCUUUGCACUGUUCAAACaCU.................... len:22 al:4
.................................................UUCUUUGCACUGUcCAAACCCU.................... len:22 al:6
.................................................UUCUUUGCACaGUUCAAACCC..................... len:21 al:1
.................................................UUCUUUGCACUGUUCAAACCCg.................... len:22 al:73
.................................................UUCUUUGCACUGUUCAAACC...................... len:20 al:194
.................................................UUCUUUGuACUGUUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCAuUGUUCAAACCCU.................... len:22 al:4
.................................................UUCUUUGCACUGUUCAAACuC..................... len:21 al:4
.................................................UUCUUgGCACUGUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAgCCCU.................... len:22 al:6
.................................................UUCUcUGCACUGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAgCCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACCCUGCC................. len:25 al:12
.................................................UUCUUUGCcCUGUUCAAACC...................... len:20 al:1
.................................................UUCUUUGCACUGUUCAAACCCc.................... len:22 al:338
.................................................UUCUUUaCACUGUUCAAACCCU.................... len:22 al:3
.................................................UUCUUUGCACUGUUCAAACCCcGCC................. len:25 al:1
.................................................aUCUUUGCACUGUUCAAACCCU.................... len:22 al:2
.................................................UUCUUUGCAuUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGg.................. len:24 al:9
.................................................UUCUUUGCACUGUUCAAACCCUu................... len:23 al:168
.................................................UUCUUUGCACUGcUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCACUGUUCAAACCCUuC.................. len:24 al:8
.................................................UUCUUUGCACUGUUCAAcCCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGC.................. len:24 al:486
.................................................UUCUUUGCACUGUUuAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAAuCCU.................... len:22 al:2
.................................................UUCUUUGCACUGcUCAAACCCUG................... len:23 al:2
.................................................UUCUUUGCACUGUUCAAuCCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAAuCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCgGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAgCCC..................... len:21 al:2
.................................................UUCUUUGCACUGUUCAAACCCUGuC................. len:25 al:4
.................................................UUCUUUGCgCUGUUCAAACCCU.................... len:22 al:13
.................................................UUCUUUGCACUGcUCAAACCCU.................... len:22 al:4
.................................................UUCUUUGCcCUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCgAACCCU.................... len:22 al:11
.................................................UUCUcUGCACUGUUCAAACC...................... len:20 al:1
.................................................UUCUUUGCACUGUUCAAACCCcG................... len:23 al:3
.................................................UUCUUUGCACUGUUCgAACC...................... len:20 al:3
.................................................cUCUUUGCACUGUUCAAACCCUG................... len:23 al:2
.................................................UUuUUUGCACUGUUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCgCUGUUCAAACCC..................... len:21 al:2
.................................................cUCUUUGCACUGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAA........................ len:18 al:1
.................................................UUCUUUGCACUGUUCAAACCCUGCa................. len:25 al:19
.................................................UUCUUUGCACUGUUCgAACCCUG................... len:23 al:3
.................................................UUCUUUGCACUGUUCAAu........................ len:18 al:2
.................................................UUCUUUGCACUGUUCAAACCa..................... len:21 al:76
.................................................UUCUUUGCACUGUUCAAACCuU.................... len:22 al:20
.................................................UUCUUUGCACUGUUCuAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCCU.................... len:22 al:2872
.................................................UUCUUUGCACUGUUCcAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACcGUUCAAACCCU.................... len:22 al:7
.................................................UUCUUUGCACUGUUCAAACCCa.................... len:22 al:355
.................................................UUCUUUGCACUGUUCAAACCu..................... len:21 al:132
.................................................UUCUUUGCACUGUUCcAACCCU.................... len:22 al:1
.................................................UUCUUcGCACUGUUCAAACCCU.................... len:22 al:15
.................................................UUCUUUGCACUGUUCAAAC....................... len:19 al:25
.................................................UUCUUUGCACUGUUCAAACCCUGCuC................ len:26 al:2
.................................................UUCUUUGCACUuUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACa...................... len:20 al:16
.................................................UUCUUUGCACcGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACCCcGC.................. len:24 al:1
.................................................UUCUcUGCACUGUUCAAACCCUG................... len:23 al:2
.................................................UUCUUUGCACUGUcCAAACCC..................... len:21 al:2
.................................................UUCUUUGCACaGUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCC..................... len:21 al:598
.................................................UUCgUUGCACUGUUCAAACCC..................... len:21 al:2
.................................................UUCUUUGCACUGUUCAAACCCUGa.................. len:24 al:26
.................................................UcCUUUGCACUGUUCAAACCCU.................... len:22 al:9
.................................................UUCUUUGCACUaUUCAAACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAgACCCU.................... len:22 al:8
.................................................UUCUUUGCACUGUcCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACaCUG................... len:23 al:3
.................................................UUCUaUGCACUGUUCAAACCCU.................... len:22 al:2
.................................................UUCUUUGCACUGUUCA.......................... len:16 al:3
.................................................UUCUUUGuACUGUUCAAACCCU.................... len:22 al:3
.................................................UcCUUUGCACUGUUCAAACCCUGC.................. len:24 al:2
.................................................UUCUUUGCACUGUUCAAACuCU.................... len:22 al:2
.................................................UUCUUUGCACUGUUCAAACCuUGC.................. len:24 al:1
.................................................UUCcUUGCACUGUUCAAACCCUGC.................. len:24 al:1
.................................................UUCUUUGCACUGUUCAAACCCUaC.................. len:24 al:2
.................................................UUCUUUGCuCUGUUCAAACCCU.................... len:22 al:1
.................................................UUCcUUGCACUGUUCAAACCCU.................... len:22 al:14
.................................................UUCUUUGCACcGUUCAAACCC..................... len:21 al:1
.................................................UUCcUUGCACUGUUCAAACCC..................... len:21 al:7
.................................................UUCUcUGCACUGUUCAAACCCU.................... len:22 al:6
.................................................UUCUUUGCACUGUUCAcACCCU.................... len:22 al:1
.................................................UUCUUUGCACUGUUCAAACCaU.................... len:22 al:6
..................................................UCUUUGCACUGUUCAAACCCUGu.................. len:23 al:19
..................................................UCUUUGCACUGUUCAAACCCUa................... len:22 al:1
..................................................UCUUUGCACUGUUCAAACCCUGa.................. len:23 al:2
..................................................UCUUUGCACUGUUCAAACCCUG................... len:22 al:2
..................................................UCUUUGCACUGUUCAAACC...................... len:19 al:1
..................................................UCUUUGCACUGUUCAAACCCUGC.................. len:23 al:14
..................................................UCUUUGCACUGUUCAAACCCa.................... len:21 al:4
..................................................UCUUUGCACUGUUCAAACuC..................... len:20 al:1
..................................................UCUUUGCACUGUUCAAACCCUGCa................. len:24 al:1
..................................................UCUUUGCACUGUUCAAACCCc.................... len:21 al:4
..................................................UCUUUGCACUGUUCAAACCCUu................... len:22 al:1
..................................................UCUUUGCACUGUUCAAACCCUGCu................. len:24 al:5
..................................................UCUUUGCACUGUUCAAACCC..................... len:20 al:4
..................................................cCUUUGCACUGUUCAAACCC..................... len:20 al:1
..................................................UCUUUGCACUGUUCAAACCCU.................... len:21 al:23
..................................................UCUUUGCACUGUUCAAACu...................... len:19 al:1
..................................................UCUUUGCACUGUUCAAACCCUGCuC................ len:25 al:1
...................................................CUUUGCACUGUUCAAACCCU.................... len:20 al:241
...................................................CUUUGCACUGUUCAAACCC..................... len:19 al:14
...................................................CUUUGCACUGUUCAAACu...................... len:18 al:5
...................................................CUUUGCACcGUUCAAACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCcAACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAACCCc.................... len:20 al:37
...................................................CUUUGCACUGUUCAAgCCCU.................... len:20 al:1
...................................................uUUUGCACUGUUCAAACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAACCa..................... len:19 al:22
...................................................CUUUGCACUGUUCAAcCCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCAAACCCg.................... len:20 al:10
...................................................CUUUGCACUGUUCAAACCCUGu.................. len:22 al:17
...................................................CUUUGCACcGUUCAAACC...................... len:18 al:1
...................................................CUUUGCACUGUUCAcACCCU.................... len:20 al:1
...................................................CUUUGCACUGUUCgAACCCU.................... len:20 al:2
...................................................CUUUGCACUGUUCAAACCCcG................... len:21 al:1
...................................................CUUUGCACUGUUCAAACCCUGCCa................ len:24 al:1
...................................................CUUUGCACUGUUCAAACCCa.................... len:20 al:28
...................................................CUcUGCACUGUUCAAACCCU.................... len:20 al:4
...................................................CcUUGCACUGUUCAAACCCU.................... len:20 al:2
...................................................CUUUGCACUGUUCAAACCCUa................... len:21 al:9
...................................................CUUUGCACUGUUCAAACC...................... len:18 al:28
...................................................CUUUGCACUGUUCAAACCu..................... len:19 al:1
...................................................CUUUGCACUGUUCAAACCCUu................... len:21 al:6
...................................................CUUUGCACUGUcCAAACCCU.................... len:20 al:2
...................................................CUUUGCACUGUUCAAACg...................... len:18 al:1
...................................................CUUUGCACUGUUCAAACCCUGC.................. len:22 al:10
...................................................CUUcGCACUGUUCAAACCCUG................... len:21 al:1
...................................................CUUUGCACUGUUCAAACCCUG................... len:21 al:18
...................................................CUUUGCACUGUUCAAACa...................... len:18 al:7
...................................................CUUUGCACUGUUuAAACCCU.................... len:20 al:1
....................................................UUUGCACUGUUCAAACCCUGCu................. len:22 al:5
....................................................UUUGCACUGUUCAAACCCUGC.................. len:21 al:1
....................................................UUUGCACUGUUCAAACCCUGu.................. len:21 al:2
....................................................UUUGCACUGUUCAAACCCU.................... len:19 al:10
.....................................................UUGCACUGUcCAAACCCU.................... len:18 al:1
.....................................................UUGCACUGUUCAAACCCc.................... len:18 al:5
.....................................................UUGCACUGUUCAAACCCUGu.................. len:20 al:10
.....................................................UUGCACUGUUCAAACCCU.................... len:18 al:14
.....................................................UUGCACUGUUCAAACCCUa................... len:19 al:4
.....................................................UUGCACUGUUCAAACCCUGC.................. len:20 al:6
.....................................................UUGCACUGUUCAAACCCUGa.................. len:20 al:1
.....................................................UUGCACUGUUCAAACCCUGCu................. len:21 al:5
.....................................................UUGCACUGUUCAAACCCa.................... len:18 al:1
.....................................................UUGCACUGUUCAAACCCUGuC................. len:21 al:1
.....................................................UUGCACUGUUCAAACCCUu................... len:19 al:1
.....................................................UUGCACUGUUCAAACCCUG................... len:19 al:33
......................................................UGCACUGUUCAAACCCUG................... len:18 al:2
.......................................................GCACUGUUCAAACCCUGC.................. len:18 al:1
.......................................................GCACUGUUCAAACCCUGu.................. len:18 al:2