Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: ptg000004l:1859862-1859953 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_3301.ps.pdf
Locus Name: Cluster_3301
CUGUUUACGGUUUAACUGGGUAGCAUAACAUUGUAAGAGAUCUUUAAAGGUCUCUUACAUUGUUGUGCUGCCUGGAAAAACUGAACUGACUG
..(((..((((((..(((((((((((((((.((((((((((((....)))))))))))).)))))))))))))))..))))))....))).. (-46.60)
CUGUUUACGGUUUAACUGGG........................................................................ len:20 al:2
CUGUgUACGGUUUAACUGGG........................................................................ len:20 al:4
CUGUUUACGGUUUAACUGGGa....................................................................... len:21 al:1
.UGUgUACGGUUUAACUGGG........................................................................ len:19 al:2
...................cUAGCAUAACAUUGUAAGAGAUCU................................................. len:24 al:1
....................UAuCAUAACAUUGUAAG....................................................... len:17 al:1
....................UAGuAUAACAUUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAACAUUGUAAGAGAc................................................... len:21 al:2
....................aAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:15
....................UAGCAaAACAUUGUAAGAGAUCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGAaC.................................................. len:22 al:1
....................UAGCAUAACAUUGUAAGAG..................................................... len:19 al:13
....................UAGCAgAACAUUGUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUcA.............................................. len:26 al:2
....................UAGCAUAACAUUGUgAG....................................................... len:17 al:3
....................gAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:6
....................UAGCAUAACAUUGUAAGAGg.................................................... len:20 al:1
....................UAGCAUAACAUUGUAAGAGAcC.................................................. len:22 al:8
....................UgGCAUAACAUUGUAAG....................................................... len:17 al:4
....................UAGCAUAACAcUGUAAGAGAUCU................................................. len:23 al:27
....................UAGCAUAACAUUGUgAGAGAUCUUU............................................... len:25 al:3
....................UAGCAUAACgUUGUAAGAGAUCUU................................................ len:24 al:2
....................UAuCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUg.................................................. len:22 al:1
....................UAGCAUAACAUUGUAAGAGu.................................................... len:20 al:1
....................UuGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:10
....................UAGCAUAACAUUGcAAGAGAUCU................................................. len:23 al:23
....................UAGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:624
....................UAGCAUAACAUUGUAAGAGAUCUUUAAAGa.......................................... len:30 al:1
....................cAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:36
....................UAGCAUAACAUUGUAAGAGAUCUUc............................................... len:25 al:24
....................UgGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:37
....................UAGCAUAACAUUGUAAGAaAUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUgAGAGAUCU................................................. len:23 al:24
....................UAGCAUAACAUUGUAAa....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUa.................................................. len:22 al:10
....................UAGCAUAACAUUGUuAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGUAgG....................................................... len:17 al:6
....................UAGCAUAACAUUGgAAGAGAUCU................................................. len:23 al:1
....................UcGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:2
....................UuGCAUAACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUaUUU............................................... len:25 al:1
....................UAGCAUAACcUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACcUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUA.............................................. len:26 al:42
....................UAaCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:2
....................UAGCAUAACAUcGUAAGAGAUCUU................................................ len:24 al:4
....................UAaCAUAACAUUGUAAG....................................................... len:17 al:2
....................UAGCAUAACAUUGUAAGAGuUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUc.............................................. len:26 al:2
....................UAGCAUAACAcUGUAAG....................................................... len:17 al:2
....................UAGCAUgACAUUGUAAGAGAU................................................... len:21 al:1
....................UAGCAUAgCAUUGUAAG....................................................... len:17 al:15
....................UAGCAUAuCAUUGUAAGAGAUCUU................................................ len:24 al:1
....................UAGuAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCcU................................................ len:24 al:6
....................UAGCAUAACAUUGUAAGAGAUCa................................................. len:23 al:435
....................UAGCAUAACAUUGUAAGAGAgC.................................................. len:22 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUu.............................................. len:26 al:98
....................UAGCAUAACAUUGUAuGAGAUCU................................................. len:23 al:4
....................UAGCAUAACAUUGUAAGAGAUCUaUA.............................................. len:26 al:6
....................UAGCAUAAaAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAuCAUUGUAAGAGAUCU................................................. len:23 al:3
....................UAGCgUAACAUUGUAAGAGAUCUU................................................ len:24 al:4
....................UAGCAgAACAUUGUAAGA...................................................... len:18 al:17
....................UAGCAUcACAUUGUAAGAGAUCU................................................. len:23 al:8
....................cAGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:3
....................UAGCAUAACAUUGUAAGAGAUCUUUAAAG........................................... len:29 al:3
....................UAGCAUAACAUUGUAAGAGAcCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUuA............................................. len:27 al:2
....................UAGCAUAACAUUGUgAGAGAUCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGAUaUUUA.............................................. len:26 al:1
....................UAGCAUAACAUUGUAAGAGA.................................................... len:20 al:64
....................UAGCAUAACAcUGUAAGAGAUCUUU............................................... len:25 al:2
....................UAGCAUAACAUUGUAAGAGAUuUU................................................ len:24 al:2
....................UAGCAUAACAUUGUAAGAGAUu.................................................. len:22 al:35
....................UAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:12815
....................UAGCAUAACAUUGUAAGAGgUCUUU............................................... len:25 al:2
....................UAGCAUAACAUUGUAAGAGAgCU................................................. len:23 al:8
....................UAGCAUAACAUUGUAAGAGAU................................................... len:21 al:50
....................UAGCAUAACAUUGUAAGAuAUCU................................................. len:23 al:1
....................UAGCAUAcCAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGuAUAACAUUGUAAGAGAUCU................................................. len:23 al:19
....................UAGCAUAACAUUGUAAGAGAUCUgU............................................... len:25 al:2
....................UAGCAUAACAUUGUAAGAGAUCUa................................................ len:24 al:56
....................UAGCAUAACAUUGUAAGAGAgCUU................................................ len:24 al:1
....................UAGCAUAACAaUGUAAGAGAUCU................................................. len:23 al:2
....................UAGCAUAACAUUGUAAGAGAUCcUU............................................... len:25 al:2
....................UAGCuUAACAUUGUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUcAGAGAUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUAAGAGgUCU................................................. len:23 al:47
....................UAGCAUAACcUUGUAAGAGAUCU................................................. len:23 al:6
....................UAGCAUAACgUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGcAAG....................................................... len:17 al:2
....................UAGCAUAACAUcGUAAGAGAU................................................... len:21 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUaA.............................................. len:26 al:5
....................UAGCAUAgCAUUGUAAGAGAU................................................... len:21 al:1
....................UgGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGgGAUC.................................................. len:22 al:4
....................UAGCcUAACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUcGUAAGAGAUCUUU............................................... len:25 al:7
....................UAGCAUAACAUUGUAgGAGAUCUU................................................ len:24 al:4
....................UAGCAUAACAUUGUAcGAGAUCU................................................. len:23 al:6
....................UAGCAUAgCAUUGUAAGAGAUCU................................................. len:23 al:106
....................UAGCAUAACAUUGUAAGAGAUCUUUAAAGG.......................................... len:30 al:2
....................UAGCAUAACAUUGUAAGAGAcCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGAUCaUU............................................... len:25 al:4
....................UAGCAUAACAUUGUAAGAGAUCUUa............................................... len:25 al:69
....................UAGCAUAACAUUGUAAGAGcUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUAAGAGAUuU................................................. len:23 al:19
....................UAGCAUAACAUUGUAAGAGAUCUaUAA............................................. len:27 al:1
....................UAGCAUAACuUUGUAAGAGAUCU................................................. len:23 al:2
....................UAGCAUAACAUUGcAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAACAUUGUAAGg...................................................... len:18 al:3
....................UAGCAUAACAUUGUAAG....................................................... len:17 al:992
....................UAGCAUAAuAUUGUAAGAGAUCU................................................. len:23 al:4
....................UAGCAUgACAUUGUAAGAGAUCU................................................. len:23 al:26
....................UAGCAUAACAUUGUAAGAGAUCUg................................................ len:24 al:8
....................UAGCAUgACAUUGUAAGAGAUCUU................................................ len:24 al:3
....................UAGCAUAACAgUGUAAGA...................................................... len:18 al:1
....................UAGCAUAACAUaGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGUAAGAGAUCUcU............................................... len:25 al:6
....................UAGCAUAACAUUGUcAG....................................................... len:17 al:1
....................UAGCAcAACAUUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCcUAACAUUGUAAGAGAUCU................................................. len:23 al:5
....................cAGCAUAACAUUGUAAG....................................................... len:17 al:2
....................UAGuAUAACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAgUGUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUaUAAG....................................................... len:17 al:1
....................UAGCAUgACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGgGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCUc................................................ len:24 al:48
....................UAGCAUAACgUUGUAAGAGAUCUUU............................................... len:25 al:3
....................UAGCAUAACAUUGUAAGAGAUCUUUAu............................................. len:27 al:3
....................UAuCAUAACAUUGUAAGAGAUCU................................................. len:23 al:3
....................UAGCAUAuCAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:958
....................UAGCAUAACgUUGUAAGAGAUCU................................................. len:23 al:32
....................UAGCAUAACAUUGUAAGA...................................................... len:18 al:50
....................UAGCAUAACAUcGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUAAu............................................ len:28 al:2
....................UAGCAUAACAUUGUAAGAGAcCU................................................. len:23 al:41
....................UAGCAUAACAUUGUAAGgGAUCUU................................................ len:24 al:8
....................UAGCAUAACAUUGUAAGcGAUCU................................................. len:23 al:2
....................UAGCAUAACAUcGUAAGAGAUCU................................................. len:23 al:33
....................UAGCAUAACAUUGcAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUuUUU............................................... len:25 al:3
....................UAGCAUAACAUUGUAAGgGAUCU................................................. len:23 al:50
....................UAGCAUAACAUUGUAgGAGAUCUUU............................................... len:25 al:4
....................UAGCgUAACAUUGUAAGAGAUCU................................................. len:23 al:25
....................UAGCAUAACAUUGUAAGAGgUC.................................................. len:22 al:2
....................UAGCAUAACAUgGUAAGAGAUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUAgGAGAUCU................................................. len:23 al:46
....................UAGCAcAACAUUGUAAGAGAUCU................................................. len:23 al:30
....................UAGCAUAgCAUUGUAAGAGAUCUUU............................................... len:25 al:2
....................UAGCAUAgCAUUGUAAGAGAUCUU................................................ len:24 al:6
....................UAGCAUcACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAaCU................................................. len:23 al:4
....................UAGCAUAACAUUGUAAGAGAUaU................................................. len:23 al:3
....................UcGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGaAAGAGAUCU................................................. len:23 al:2
....................UAaCAUAACAUUGUAAGAGAUCU................................................. len:23 al:9
....................UAGCAUAACAUUGUAuGAGAUCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGAUCUaU............................................... len:25 al:95
....................UAGCAUAACAUUGUuAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGgUCUU................................................ len:24 al:3
....................UAGCAUAACAcUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAACAUUGUAAGAGAUCaU................................................ len:24 al:7
....................UAGCAUAACAUUGUAAGAGAUCUUUAAA............................................ len:28 al:1
....................UAGCAUAACAUUaUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUCc................................................. len:23 al:1096
....................UAGCAcAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAaAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAaAGAUCUUU............................................... len:25 al:1
....................UgGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGcUCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGgU................................................... len:21 al:1
.....................AGCAUAACAUUGUAAGAGAUCU................................................. len:22 al:18
.....................AGCAUAACAUUGUAAGAGAU................................................... len:20 al:2
.....................AGCAUAACAUUGUAAGAGAUCUUc............................................... len:24 al:1
.....................AGCAUAACAUUGUAAGAGAUCUUa............................................... len:24 al:4
.....................AGCAUAACAUUGUAAGAGAUCUU................................................ len:23 al:1
.....................gGCAUAACAUUGUAAGAGAUCU................................................. len:22 al:1
.....................AGCAUAACgUUGUAAGAGAUCU................................................. len:22 al:1
.....................AGCAUAACAUUGUAAGAGAUCUUU............................................... len:24 al:1
.....................AGCAUAACAUUGUAAGAGAUCUaU............................................... len:24 al:1
.....................AGCAUAACAUUGUAgGAGAUCU................................................. len:22 al:1
......................GCAUAACAUUGUAAGAGAUCU................................................. len:21 al:9
......................GCAUAACAUUGUAAGAGAUCc................................................. len:21 al:1
.......................CAUAACAUUGUAAGAGAUCa................................................. len:20 al:1
.......................CAUAACAUUGUAAGAGAUCU................................................. len:20 al:3
........................AUAACAUUGUAAGAGAUCc................................................. len:19 al:1
........................AUAACAUUGUAAGAGAUCUUU............................................... len:21 al:1
........................AUAACAUUGUAAGAGAUCU................................................. len:19 al:6
.........................UAACAUUGUAAGAGAUCU................................................. len:18 al:2
.........................UAACAUUGUAAGAGAUCc................................................. len:18 al:2
..........................................UUUAAAGGUCUCUUACAUUGUUGUGCUGCC.................... len:30 al:3
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCC.................... len:29 al:18
...........................................UUAAAGGUCUCUUACAUUGUUGUGCcGCC.................... len:29 al:1
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCa.................... len:29 al:1
...........................................UUAAAGGUCUCUUACAUUGcUGUGCUGCC.................... len:29 al:1
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCu.................... len:29 al:4
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCCa................... len:30 al:6
............................................UAAAGGUCUCUUACAUUGUUGUG......................... len:23 al:1
................................................GGUCUCUUACAUUGUUGUGCUGCC.................... len:24 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCCUu.................. len:25 al:8
.................................................GUCUCcUACAUUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUuC..................... len:22 al:1
.................................................GUCUCUUACcUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCcCUUACAUUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCaU................... len:24 al:1
.................................................GUCUCUUACAUUGUUGUGCc....................... len:20 al:1
.................................................GUCUCUUACAUUGUUGcGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUaCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:666
.................................................GUCUaUUACAUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGg..................... len:22 al:1
.................................................GUCUCUUACAUUGUcGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGuUGC..................... len:22 al:2
.................................................GUCUCUUACAUUGUUGUGCg....................... len:20 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCCUa.................. len:25 al:2
.................................................GcCUCUUACAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAcUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGcUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCaUG.................. len:25 al:2
.................................................GUCUCUUACAUUGUcGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCcGCC.................... len:23 al:9
.................................................GUCUCUUACAUUGUUGUGCUGCCc................... len:24 al:8
.................................................GUCUCUUACAUcGUUGUGCUGCC.................... len:23 al:3
.................................................GUCUCUUACAUUGUUGUGCUGa..................... len:22 al:8
.................................................GUCUCUUACAUUGUUGUGCUaC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUGuC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCg.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCcGCCU................... len:24 al:1
.................................................GUCUCUUACAUUGUUGUGCgGCC.................... len:23 al:1
.................................................GUCUCUUgCAUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUu...................... len:21 al:1
.................................................GUCUCUUACAUUGUUGUGCU....................... len:20 al:8
.................................................GUCUCUUACAUUGUUGUGCa....................... len:20 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCuU................... len:24 al:3
.................................................GUCUCUUACAUUGUUGUGCUGCCa................... len:24 al:212
.................................................GUCUCUUACAUUGUUGUGCUGC..................... len:22 al:184
.................................................GUCUCUUACAUUGUUGUGCUGCCUc.................. len:25 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCu.................... len:23 al:146
.................................................GUCUCUUACAUUGUUGUGCcGC..................... len:22 al:1
.................................................GUCUCUUcCAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GcCUCUUACAUUGUUGUGCUGC..................... len:22 al:2
.................................................GUCUCUUACAUUGUUGUGCgGC..................... len:22 al:1
.................................................GUCUCUUAaAUUGUUGUGCUGCC.................... len:23 al:1
.................................................aUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGcGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUcGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCCg................... len:24 al:3
.................................................GUCUCUUACAUUGUUaUGCUGCC.................... len:23 al:2
.................................................GUCUCUUuCAUUGUUGUGCUGCC.................... len:23 al:1
.................................................cUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:3
.................................................GUCUCUUACAUUGUUGUGCUGCCU................... len:24 al:72
.................................................GUCUCUUACAUUGUUGUGCUGu..................... len:22 al:27
.................................................GUCUCUUACgUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUaCUGCCU................... len:24 al:1
.................................................GUCUCUUACgUUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUaGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUa...................... len:21 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCa.................... len:23 al:80
.................................................GUCUCUUACAUUGUUGUGCUG...................... len:21 al:9
..................................................UuUCUUACAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACcUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACgUUGUUGUGCUGCC.................... len:22 al:4
..................................................UCUCUUACAUUGUUGcGCUGCCU................... len:23 al:3
..................................................UCUCUUAuAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUgCAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGuCU................... len:23 al:1
..................................................UCUCUUACAUUGUUGUGCUGCC.................... len:22 al:626
..................................................UCUCUUACAUUGUUGUGCUGaC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCUu.................. len:24 al:10
..................................................UCUCUUACAUUGUUGUGCU....................... len:19 al:16
..................................................UCUCUUACAUUGUUGUGC........................ len:18 al:2
..................................................UCcCUUACAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGu..................... len:21 al:8
..................................................UCUCUUACAUUGgUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCa................... len:23 al:121
..................................................UCUCUUACAcUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCg................... len:23 al:3
..................................................UCUCUUACAUUGUUGUGCUGCCU................... len:23 al:43
..................................................UCUCUUACAUcGUUGUGCUGCC.................... len:22 al:4
..................................................UCUCUUcCAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUcACAUUGUUGUGCUGCC.................... len:22 al:3
..................................................UCUCUUACAUUGUUGUaCUGCC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCUGa..................... len:21 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCc................... len:23 al:6
..................................................UCUCUUACAUUGUUGUGCc....................... len:19 al:2
..................................................cCUCUUACAUUGUUGUGCUGCC.................... len:22 al:3
..................................................UCUCUUACAUUGUUGUGCcGCC.................... len:22 al:9
..................................................UCUCUUACAUUGUUGUGCUG...................... len:20 al:7
..................................................UCUCcUACAUUGUUGUGCUGCC.................... len:22 al:7
..................................................UCUCUUACAUUGcUGUGCUGCC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGcGCUGCC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCUGCCUa.................. len:24 al:4
..................................................UCUCUUACAUUGUUGUGCUGCu.................... len:22 al:133
..................................................UCUCUUACAUUGUUGUGCUGCa.................... len:22 al:70
..................................................UCUCUUACAUUGUUGUGCUGCg.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCUGuC.................... len:22 al:2
..................................................UCUCUUACAUUGUcGUGCUGCC.................... len:22 al:3
..................................................UCUCUUACAUUGUUGUGCUGCuU................... len:23 al:3
..................................................UCUCUUACAUUGUUGUGCgGC..................... len:21 al:1
..................................................UCUCUUACAUUGUUGUGCa....................... len:19 al:1
..................................................UCUCUUACAUUGUUGUGCUGC..................... len:21 al:61
...................................................CUCUUACAUUGUUGUGCUGC..................... len:20 al:1
...................................................CcCUUACAUUGUUGUGCUGCCU................... len:22 al:1
....................................................UCUUACAUUGUUGUGCUGCC.................... len:20 al:1
....................................................UCUUACAUUGUUGUGCUGCCU................... len:21 al:1
....................................................UCUUACAUUGUUGUGCUGC..................... len:19 al:1
....................................................UCUUACAUUGUUGUGCUGCa.................... len:20 al:1
.....................................................CUUACAUUGUUGUGCUGCa.................... len:19 al:1
.....................................................CUUACAUUGUUGUGCUGCC.................... len:19 al:1
......................................................UUACAUUGUUGUGCUGCC.................... len:18 al:1
.......................................................UACAUUGUUGUGCUGCCa................... len:18 al:1