Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000004l:1859862-1859953 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/strucVis/Cluster_3169.ps.pdf
Locus Name: Cluster_3169
CUGUUUACGGUUUAACUGGGUAGCAUAACAUUGUAAGAGAUCUUUAAAGGUCUCUUACAUUGUUGUGCUGCCUGGAAAAACUGAACUGACUG
..(((..((((((..(((((((((((((((.((((((((((((....)))))))))))).)))))))))))))))..))))))....))).. (-46.60)
CUGUgUACGGUUUAACUGGG........................................................................ len:20 al:4
CUGUUUACGGUUUAACUGGG........................................................................ len:20 al:2
CUGUUUACGGUUUAACUGGGa....................................................................... len:21 al:1
.UGUgUACGGUUUAACUGGG........................................................................ len:19 al:2
...................cUAGCAUAACAUUGUAAGAGAUCU................................................. len:24 al:1
....................UAGCAUAACAUUGUAAGAGAUg.................................................. len:22 al:1
....................UAGCAUAuCAUUGUAAGAGAUCU................................................. len:23 al:3
....................UAGCAUAgCAUUGUAAG....................................................... len:17 al:15
....................UAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:12397
....................UAGCAUAACAUUGUAAGAGu.................................................... len:20 al:1
....................UAGCAUAACAUUGUAAGcGAUCU................................................. len:23 al:2
....................UAGCAUAACAUUGUgAGAGAUCUU................................................ len:24 al:1
....................UAGCAUgACAUUGUAAGAGAU................................................... len:21 al:1
....................UAGCAUAACAcUGUAAG....................................................... len:17 al:2
....................UAGCAUAACAUUGaAAGAGAUCU................................................. len:23 al:2
....................UcGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUaGUAAGAGAUCU................................................. len:23 al:5
....................UgGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:37
....................UAGCAUAACAUUGUAAGAGAcC.................................................. len:22 al:8
....................UgGCAUAACAUUGUAAG....................................................... len:17 al:4
....................UAGCAUAACAUcGUAAGAGAUCUUU............................................... len:25 al:6
....................UAGCgUAACAUUGUAAGAGAUCUU................................................ len:24 al:4
....................UAGCAgAACAUUGUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAcUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAgCAUUGUAAGAGAUCU................................................. len:23 al:102
....................UAGCAUAACAUUaUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUA.............................................. len:26 al:37
....................UAGCAUAACAUUGUAcGAGAUCU................................................. len:23 al:5
....................UAGCAUAAuAUUGUAAGAGAUCU................................................. len:23 al:4
....................UAGCAUAACAUUGUAAGAaAUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUAAGAGAgCU................................................. len:23 al:8
....................UAGCAUAACAUUGUcAGAGAUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUcAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUc.............................................. len:26 al:2
....................UAuCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUaA.............................................. len:26 al:5
....................UAGCAUAACgUUGUAAGAGAUCUUU............................................... len:25 al:3
....................UgGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
....................UAaCAUAACAUUGUAAGAGAUCU................................................. len:23 al:9
....................UAGCAUAACgUUGUAAGAGAUCUU................................................ len:24 al:2
....................cAGCAUAACAUUGUAAG....................................................... len:17 al:3
....................UAGCAUAACAUcGUAAGAGAUCUU................................................ len:24 al:4
....................UAGCAUcACAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGUAAGAuAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUa............................................... len:25 al:69
....................UAGCAUAACAUUGUuAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGUAAGgGAUCUUU............................................... len:25 al:1
....................cAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:35
....................UAGCAcAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUAAAG........................................... len:29 al:3
....................UAGCAUAACAUUGUAAGAGAUCUUUu.............................................. len:26 al:93
....................UAGCAUAACAUUGUAAG....................................................... len:17 al:1107
....................UAGuAUAACAUUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAACgUUGUAAGAGAUCU................................................. len:23 al:32
....................UAGCAcAACAUUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAACAUUGUAAGAGAUCUcU............................................... len:25 al:4
....................UAGCAUAACAUUGUAgG....................................................... len:17 al:6
....................UAGCAUAACAUUGUAAGAGAUuUUU............................................... len:25 al:3
....................UAGCAUAACAUUGUAAGAGAUCc................................................. len:23 al:1061
....................UAGCAUAACAUUGUAAGA...................................................... len:18 al:48
....................UAGCAUAACAUUGUAAGAGAUCUUcA.............................................. len:26 al:2
....................UAGCAUAACAUUGUAAGAGAgC.................................................. len:22 al:1
....................UAGCAUAACAUUGUAAGAGAcCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:930
....................UAGCAUAACAUUGUAAGAGAUCa................................................. len:23 al:435
....................UAGCAUAACAUgGUAAGAGAUCU................................................. len:23 al:3
....................UAGCAUAACAUUGUAAGAGAUCUgU............................................... len:25 al:2
....................UAGCAUAACAUcGUAAGAGAUCU................................................. len:23 al:32
....................UAGCAUAACAUUGUAAGAGAUCUUc............................................... len:25 al:24
....................UAGCAUAgCAUUGUAAGAGAUCUU................................................ len:24 al:6
....................UAGCAUAACAUUGUAAGAGAUCcUU............................................... len:25 al:2
....................UAGCAUAACAUUGUAAGAGAUaU................................................. len:23 al:3
....................aAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:15
....................UAGCAUAACAUUGUAAaAGAUCU................................................. len:23 al:1
....................UAGCAUAgCAUUGUAAGAGAUCUUU............................................... len:25 al:2
....................UAGCAUAACAUcGUAAGAGAU................................................... len:21 al:1
....................UAGCAUAACAUUGUAAGAGAUCUaUA.............................................. len:26 al:6
....................UAGCAUAACAUUGUAAGAGg.................................................... len:20 al:1
....................UAGCAUAAaAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGUAAGAGAUCUUUAAu............................................ len:28 al:2
....................UAGCAUAACAUUGUAgGAGAUCU................................................. len:23 al:45
....................UuGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:10
....................UAGCAUAACAUUGUAAGAGgUCU................................................. len:23 al:45
....................gAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:6
....................UAGCAUAACAUUGUAAGAGAcCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAaAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGgU................................................... len:21 al:1
....................UAGuAUAACAUUGUAAGAGAUCU................................................. len:23 al:18
....................UAaCAUAACAUUGUAAG....................................................... len:17 al:2
....................UAGCAUAACAUUGUAAGAGAUCUUUuA............................................. len:27 al:2
....................UAGCAUAACAUUGUAAGAGAUaUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAc................................................... len:21 al:2
....................UAGCAUAACAgUGUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGgGAUCUU................................................ len:24 al:8
....................UAGCAUAACAUUGUAuGAGAUCU................................................. len:23 al:4
....................UAGCAUAACAUUGUAAGAG..................................................... len:19 al:13
....................UAGCAUAACAUUGcAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAcCAUUGUAAGAGAUCU................................................. len:23 al:4
....................UAGCAUAACAUUGUAAGAGAUuU................................................. len:23 al:19
....................UAGCAUAACAUUGUAAGAGA.................................................... len:20 al:64
....................UAGCAUAACAUUGUAAGg...................................................... len:18 al:3
....................cAGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:3
....................UAGCAUAACAUUGUAAGAGAaC.................................................. len:22 al:1
....................UAGCAUAACAUUGUAAGAGAUCUa................................................ len:24 al:56
....................UAGCAaAACAUUGUAAGAGAUCUU................................................ len:24 al:1
....................UAGCAUAuCAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACcUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCAUAACAUUGUAAGAGgUC.................................................. len:22 al:2
....................UAGCAUAACAUUGUAAGAGAUCcU................................................ len:24 al:5
....................UAGCAUAACAaUGUAAGAGAUCU................................................. len:23 al:2
....................UAGCAUAACAUUGUAAGAGcUCUU................................................ len:24 al:1
....................UAGCAgAACAUUGUAAGA...................................................... len:18 al:17
....................UgGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCaUU............................................... len:25 al:2
....................UAGCAUAACuUUGUAAGAGAUCU................................................. len:23 al:2
....................UAGCAUAACAUUGUAgGAGAUCUU................................................ len:24 al:3
....................UAGCAUAACAcUGUAAGAGAUCUUU............................................... len:25 al:2
....................UAGCAUAACAUUGUgAGAGAUCUUU............................................... len:25 al:3
....................UAGCAUAACAUUGUAAa....................................................... len:17 al:1
....................UAGCAUAACgUUGUAAG....................................................... len:17 al:3
....................UAGCAUAACAUUGUAAGAGAUu.................................................. len:22 al:38
....................UAGCAUAACAUUGUAAGgGAUC.................................................. len:22 al:3
....................UAGCAUAACAUUGcAAG....................................................... len:17 al:2
....................UAGCAUAACAUUGUuAG....................................................... len:17 al:1
....................UAGCAUAACAUcGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:605
....................UAGCAUAACAUUGUAAGAGAUuUU................................................ len:24 al:2
....................UAGuAUAACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCUc................................................ len:24 al:46
....................UAGCAUcACAUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAU................................................... len:21 al:48
....................UAGCAUAACAUUGUAAGAGAUCUUUAu............................................. len:27 al:3
....................UAGCAUAACAUUGgAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAgGAGAUCUUU............................................... len:25 al:4
....................UAGCAUAACAUUGUgAGAGAUCU................................................. len:23 al:24
....................UAGCAUAACAUUGUgAG....................................................... len:17 al:3
....................UAGCAUgACAUUGUAAGAGAUCU................................................. len:23 al:26
....................UAGCAUAACAUUGUAAGAGAUCUUUAAAGa.......................................... len:30 al:1
....................UcGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:2
....................UAGCAUAACAUUGUAAGAGAUa.................................................. len:22 al:9
....................UAGCAUAACAcUGUAAGAGAUCU................................................. len:23 al:27
....................UAGCAUAACAUUGUAAGAGAaCU................................................. len:23 al:4
....................UAGCAUAACAUUGUAAGAGgUCUUU............................................... len:25 al:2
....................UAGCAUAACAUUGUAAGAGcUCU................................................. len:23 al:3
....................UAGCcUAACAUUGUAAGAGAUCU................................................. len:23 al:5
....................UAGCgUAACAUUGUAAGAGAUCU................................................. len:23 al:25
....................UAGCAUAACAUUGcAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGcAAGAGAUCU................................................. len:23 al:23
....................UAGCAUAACAUUGUAAGAGAUaUUUA.............................................. len:26 al:1
....................UuGCAUAACAUUGUAAG....................................................... len:17 al:1
....................UAGCuUAACAUUGUAAGAGAUCU................................................. len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUCUUUAAA............................................ len:28 al:1
....................UAuCAUAACAUUGUAAG....................................................... len:17 al:1
....................UAuCAUAACAUUGUAAGAGAUCU................................................. len:23 al:3
....................UAaCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:2
....................UAGCAUgACAUUGUAAGAGAUCUU................................................ len:24 al:3
....................UAGCAUAACAUUGUAAGAGAcCU................................................. len:23 al:38
....................UAGCAUAACAUUGUAAGAGAUCUaU............................................... len:25 al:91
....................UAGCcUAACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAgCUU................................................ len:24 al:1
....................UAGCAUAACAUUGUAAGAGuUCU................................................. len:23 al:1
....................UAGCAcAACAUUGUAAGAGAUCU................................................. len:23 al:27
....................UAGCAUAuCAUUGUAAGAGAUCUU................................................ len:24 al:1
....................cAGCAUAACAUUGUAAGAGAUC.................................................. len:22 al:1
....................UAGCAUAACAUUaUAAG....................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCaU................................................ len:24 al:7
....................UAGCAUAACAUUGUAAGgGAUCU................................................. len:23 al:49
....................UAGCAUAACAUUGUAAGAGAUCUUUAAAGG.......................................... len:30 al:2
....................UAGCAUAACcUUGUAAGAGAUCUUU............................................... len:25 al:1
....................UAGCAUAACAUUGUAAGAGAUCUg................................................ len:24 al:5
....................UAGCAUAACAUUGUAAGAGgUCUU................................................ len:24 al:3
....................UAGCAUgACAUUGUAAG....................................................... len:17 al:1
....................UAGCAUAACAgUGUAAGA...................................................... len:18 al:1
....................UAGCAUAgCAUUGUAAGAGAU................................................... len:21 al:1
....................UAGCAUAACAUUGUAAGAGAUCUaUAA............................................. len:27 al:1
.....................AGCAUAACAUUGUAgGAGAUCU................................................. len:22 al:1
.....................AGCAUAACAUUGUAAGAGAUCUUc............................................... len:24 al:1
.....................AGCAUAACAUUGUAAGAGAUCUaU............................................... len:24 al:1
.....................AGCAUAACAUUGUAAGAGAU................................................... len:20 al:2
.....................AGCAUAACgUUGUAAGAGAUCU................................................. len:22 al:1
.....................AGCAUAACAUUGUAAGAGAUCUUU............................................... len:24 al:1
.....................AGCAUAACAUUGUAAGAGAUCUUa............................................... len:24 al:4
.....................AGCAUAACAUUGUAAGAGAUCUU................................................ len:23 al:1
.....................gGCAUAACAUUGUAAGAGAUCU................................................. len:22 al:1
.....................AGCAUAACAUUGUAAGAGAUCU................................................. len:22 al:16
......................GCAUAACAUUGUAAGAGAUCc................................................. len:21 al:1
......................GCAUAACAUUGUAAGAGAUCU................................................. len:21 al:9
.......................CAUAACAUUGUAAGAGAUCU................................................. len:20 al:3
.......................CAUAACAUUGUAAGAGAUCa................................................. len:20 al:1
........................AUAACAUUGUAAGAGAUCUUU............................................... len:21 al:1
........................AUAACAUUGUAAGAGAUCU................................................. len:19 al:6
........................AUAACAUUGUAAGAGAUCc................................................. len:19 al:1
.........................UAACAUUGUAAGAGAUCU................................................. len:18 al:2
.........................UAACAUUGUAAGAGAUCc................................................. len:18 al:2
..........................................UUUAAAGGUCUCUUACAUUGUUGUGCUGCC.................... len:30 al:3
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCa.................... len:29 al:1
...........................................UUAAAGGUCUCUUACAUUGUUGUGCcGCC.................... len:29 al:1
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCC.................... len:29 al:18
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCCa................... len:30 al:6
...........................................UUAAAGGUCUCUUACAUUGcUGUGCUGCC.................... len:29 al:1
...........................................UUAAAGGUCUCUUACAUUGUUGUGCUGCu.................... len:29 al:4
............................................UAAAGGUCUCUUACAUUGUUGUG......................... len:23 al:1
................................................GGUCUCUUACAUUGUUGUGCUGCC.................... len:24 al:1
.................................................cUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCa....................... len:20 al:1
.................................................GUCUCUUACAUUGcUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUcGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACgUUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACcUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCcGCC.................... len:23 al:9
.................................................GUCUCUUACAUUGUUGUGCUGC..................... len:22 al:173
.................................................aUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCUaUUACAUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGg..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUuC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUaUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCUGu..................... len:22 al:24
.................................................GUCUCUUACAUUGUUGUGCUGCaU................... len:24 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCCU................... len:24 al:66
.................................................GUCUCUUACAUUGUUGUGCUGCCUa.................. len:25 al:2
.................................................GUCUCUUACAUUGUUGUGCcGCCU................... len:24 al:1
.................................................GUCUCUUACAUUGUUGUGCc....................... len:20 al:1
.................................................GUCUCUUACAUUGUUGUGCg....................... len:20 al:2
.................................................GcCUCUUACAUUGUUGUGCUGC..................... len:22 al:2
.................................................GUCUCUUACAUUGUUGUGCUaC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCgGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:618
.................................................GUCcCUUACAUUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUuCAUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCuU................... len:24 al:3
.................................................GUCUCUUACAUUGUUGUGCUG...................... len:21 al:9
.................................................GUCUCUUcCAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GcCUCUUACAUUGUUGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUaCUGCCU................... len:24 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCCc................... len:24 al:8
.................................................GUCUCUUACAUUGUUGUGCUGCCg................... len:24 al:3
.................................................GUCUCUUACAUcGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCcGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUaGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCU....................... len:20 al:8
.................................................GUCUCUUACAUUGUUGUGCUaCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGCUGCCUc.................. len:25 al:2
.................................................GUCUCUUACAUUGUUGcGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUa...................... len:21 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCCUu.................. len:25 al:8
.................................................GUCUCUUACAUUGUUGUGCUGCu.................... len:23 al:144
.................................................GUCUCUUACAUUGUUGUGCUu...................... len:21 al:1
.................................................GUCUCUUACAUUGUUGUGCgGC..................... len:22 al:1
.................................................GUCUCUUACAUcGUUGUGCUGCC.................... len:23 al:3
.................................................GUCUCUUACgUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUAaAUUGUUGUGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGcGCUGCC.................... len:23 al:1
.................................................GUCUCUUACAUUGUUGUGuUGC..................... len:22 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCa.................... len:23 al:78
.................................................GUCUCcUACAUUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUUGUGCUGuC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCg.................... len:23 al:2
.................................................GUCUCUUACAcUGUUGUGCUGC..................... len:22 al:1
.................................................GUCUCUUACAUUGUcGUGCUGCC.................... len:23 al:2
.................................................GUCUCUUACAUUGUUGUGCUGCCa................... len:24 al:207
.................................................GUCUCUUACAUUGUUGUGCUGCaUG.................. len:25 al:2
.................................................GUCUCUUACAUUGUUGUGCUGa..................... len:22 al:8
.................................................GUCUCUUgCAUUGUUGUGCUGCC.................... len:23 al:1
..................................................UCUCUUACAUUGUUGUGCc....................... len:19 al:2
..................................................UCUCUUACAUUGUUGUGCUGCCUa.................. len:24 al:4
..................................................UCUCUUACAUUGUUGUGCUGuCU................... len:23 al:1
..................................................UCUCUUAuAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCc................... len:23 al:6
..................................................UCUCUUACAUUGUUGUGCUGCC.................... len:22 al:614
..................................................UCUCUUACAUUGUUGUGCU....................... len:19 al:16
..................................................UCUCUUACAUUGUUGUGCUGaC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGu..................... len:21 al:8
..................................................UCUCUUACAUUGUUGUGCUGCCg................... len:23 al:3
..................................................UCcCUUACAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCU................... len:23 al:41
..................................................UCUCUUACAUUGUUGUGC........................ len:18 al:2
..................................................UCUCUUACAUUGUUGUGCUGCa.................... len:22 al:69
..................................................UCUCUUgCAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUcGUGCUGCC.................... len:22 al:3
..................................................UCUCUUACAUUGUUGUGCUGCu.................... len:22 al:132
..................................................UCUCUUACAUUGUUGUGCUGuC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCUGCCa................... len:23 al:119
..................................................UCUCUUACAUUGUUGUGCa....................... len:19 al:1
..................................................UCUCUUACAUcGUUGUGCUGCC.................... len:22 al:4
..................................................UCUCUUACAUUGUUGcGCUGCCU................... len:23 al:3
..................................................UCUCcUACAUUGUUGUGCUGCC.................... len:22 al:7
..................................................UCUCUUACAUUGgUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUcCAUUGUUGUGCUGCC.................... len:22 al:1
..................................................cCUCUUACAUUGUUGUGCUGCC.................... len:22 al:3
..................................................UCUCUUACAUUGUUGUGCUGC..................... len:21 al:61
..................................................UCUCUUACAUUGUUGcGCUGCC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUaCUGCC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCgGC..................... len:21 al:1
..................................................UCUCUUACgUUGUUGUGCUGCC.................... len:22 al:4
..................................................UCUCUUACAcUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGcUGUGCUGCC.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCUGCuU................... len:23 al:3
..................................................UCUCUUACAUUGUUGUGCUGa..................... len:21 al:1
..................................................UCUCUcACAUUGUUGUGCUGCC.................... len:22 al:3
..................................................UuUCUUACAUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCCUu.................. len:24 al:10
..................................................UCUCUUACAUUGUUGUGCcGCC.................... len:22 al:9
..................................................UCUCUUACcUUGUUGUGCUGCC.................... len:22 al:1
..................................................UCUCUUACAUUGUUGUGCUGCg.................... len:22 al:2
..................................................UCUCUUACAUUGUUGUGCUG...................... len:20 al:7
...................................................CcCUUACAUUGUUGUGCUGCCU................... len:22 al:1
...................................................CUCUUACAUUGUUGUGCUGC..................... len:20 al:1
....................................................UCUUACAUUGUUGUGCUGCC.................... len:20 al:1
....................................................UCUUACAUUGUUGUGCUGC..................... len:19 al:1
....................................................UCUUACAUUGUUGUGCUGCCU................... len:21 al:1
....................................................UCUUACAUUGUUGUGCUGCa.................... len:20 al:1
.....................................................CUUACAUUGUUGUGCUGCC.................... len:19 al:1
.....................................................CUUACAUUGUUGUGCUGCa.................... len:19 al:1
......................................................UUACAUUGUUGUGCUGCC.................... len:18 al:1
.......................................................UACAUUGUUGUGCUGCCa................... len:18 al:1