Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000002l:14046235-14046328 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/strucVis/Cluster_3095.ps.pdf
Locus Name: Cluster_3095
AGCAAAGUGAAUACAGAAUAGGAAUGUAAGAUACUGCCAUGCAUUUAGUGUCUGGCAGUAUGUUAUUUUUCCAAUUUAGUAUUCAAAUUUUAAU
.......(((((((.((((.((((.((((.(((((((((.((((...)))).))))))))).))))..)))).)))).)))))))......... (-33.90)
AGCAAAGUGAAUACAGAAU........................................................................... len:19 al:4
AGCAAAGUGAAUgCAGAAUA.......................................................................... len:20 al:1
AGCAAAGUGAAUACAGAAUA.......................................................................... len:20 al:4
.GCAAAGUGAAUACAGAAUAG......................................................................... len:20 al:2
.aCAAAGUGAAUACAGAAUA.......................................................................... len:19 al:1
.GCAAAGUGAAUACAGAAU........................................................................... len:18 al:7
.GCAAAGUGAAUgCAGAAUA.......................................................................... len:19 al:2
.GCAAAGUGAAUACAGAAUA.......................................................................... len:19 al:11
..CAAAGUGAAUACAGAAc........................................................................... len:17 al:1
.............CAGAAUAGGAAUGUAAGAUACUGCCAUGC.................................................... len:29 al:1
.................AUAGGAAUGUAAGAUACUGCCAUGC.................................................... len:25 al:1
..................UAGGAAUGUAAGgUACUGCCAUGCA................................................... len:25 al:1
...................AGGAAUGUAAGAUACUGCC........................................................ len:19 al:4
...................AGGAAUGUAAGAUACUGCCAUGCc................................................... len:24 al:1
...................AGGAAUGUAAGAUACUGCCAUGCAgU................................................. len:26 al:1
...................AGGAAUGUAAGAUACUGCCAUG..................................................... len:22 al:1
...................AGGAAUGUAAGAUACUGCCAUGCA................................................... len:24 al:26
...................AGGAAUGUAAGgUACUGCCAUGCA................................................... len:24 al:6
...................AGGAAcGUAAGAUACUGCCAUGCA................................................... len:24 al:1
...................AGGAAUGUAAGAUACUGCCAUGC.................................................... len:23 al:5
...................AGGAAUGUAAGgUACUGCCAUGC.................................................... len:23 al:2
...................AGGAAUGUAAGAUACUGCCAUGCu................................................... len:24 al:4
...................AGGAAUGUAAGAUACUGCCAUGu.................................................... len:23 al:5
....................GGAAUGUAAGgUACUGCC........................................................ len:18 al:1
....................GGAAUGUAAGAUACUGCCAUGCc................................................... len:23 al:5
....................GGAAUGUAAGAUgCUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCAUGCAUc................................................. len:25 al:1
....................GGAAUGcAAGAUACUGCCAUGC.................................................... len:22 al:1
....................GGAAUGUAAGAUACUGCCAUGCAUUUAGUG............................................ len:30 al:2
....................GGAAUGUAAGAUACUGCCAUGa.................................................... len:22 al:8
....................GGAAUGUAAGgUACUGCCAUGCA................................................... len:23 al:211
....................GGAAUGUAAGAUACUGCCAUGCuU.................................................. len:24 al:1
....................GGAAUGUAAGAUgCUGCCAUGC.................................................... len:22 al:2
....................GGAAUGUAAGAUACUaCCAUGC.................................................... len:22 al:1
....................GGAAUGUAAGAUACUGCCAUu..................................................... len:21 al:2
....................GGAAUGUAgGAUACUGCCAUGCA................................................... len:23 al:2
....................GGAAUGUAAGAUACUGCCAUa..................................................... len:21 al:1
....................GGAAgGUAAGAUACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCA....................................................... len:19 al:1
....................GGAAUaUAAGAUACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCgUGCA................................................... len:23 al:5
....................GGAAUGUAAGAUACUGCCAUGuA................................................... len:23 al:2
....................GGAAUGUAAGAUACUGCCAUGCA................................................... len:23 al:621
....................GGgAUGUAAGAUACUGCCAUGCA................................................... len:23 al:3
....................GGAAUGUAAGAUACUGCCAUGCAU.................................................. len:24 al:9
....................GGAAUGUAAGAcACUGCCAUGC.................................................... len:22 al:1
....................GGAAUGUAAGAUACUGCu........................................................ len:18 al:6
....................GGAAUGUAAGAUACUGCCAUGCg................................................... len:23 al:6
....................GGAAUGUAAGAUACUGCCAUGCAUU................................................. len:25 al:23
....................GGAAUGUAAGAUACUGCCAUGCAa.................................................. len:24 al:12
....................GGAAUGUAAGAUACUGCCAU...................................................... len:20 al:3
....................GGAgUGUAAGAUACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGC......................................................... len:17 al:1
....................aGAAUGUAAGAUACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCAUG..................................................... len:21 al:18
....................GGAAUGUAAGAcACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGcUACUGCCAUGCA................................................... len:23 al:3
....................GGAgUGUAAGAUACUGCCAUGC.................................................... len:22 al:2
....................GGAAUGUAAGgUACUGCCAUG..................................................... len:21 al:12
....................GGAAUGUAAGAUACUGCCAUGu.................................................... len:22 al:32
....................GGAAUGUAAGAUACUGCCAUGCAUaU................................................ len:26 al:1
....................GGAAUGgAAGAUACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCAUGCAaUU................................................ len:26 al:1
....................GGAAUGUAAGAUACUGCCAUGCcUU................................................. len:25 al:1
....................GGAAUGUAAGAUACUGCCAUGCAaU................................................. len:25 al:2
....................GGAAUGUAAGAUACUGCC........................................................ len:18 al:8
....................GGAAUGUAgGAUACUGCCAUGC.................................................... len:22 al:1
....................GaAAUGUAAGAUACUGCCAUGCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCAUGCu................................................... len:23 al:39
....................GGAAUGUAAGgUACUGCCAUGC.................................................... len:22 al:68
....................GGAAUGUAAGAUACUGCCAUaCA................................................... len:23 al:1
....................GGAAUGUAAGAUACUGCCAUGC.................................................... len:22 al:172
....................GGAAUGUAAGAUACUGCCAgGC.................................................... len:22 al:1
....................GGAAUGUAAGgUACUGCCAU...................................................... len:20 al:6
....................GGAAUGUAAGAUACUGCCAUcCA................................................... len:23 al:3
.....................GAAUGUAAGAUACUGCCAUGu.................................................... len:21 al:6
.....................GAAUGUAAGAUgCUGCCAUGC.................................................... len:21 al:1
.....................GAAUGUAAGAUACUGCCAUGCA................................................... len:22 al:97
.....................GAAUGUAuGAUACUGCCAUGCA................................................... len:22 al:1
.....................cAAUGUAAGAUACUGCCAUGCA................................................... len:22 al:1
.....................GAAUGUAAGAUACUGCCAUGC.................................................... len:21 al:27
.....................GAAUGUAAGAUACUGCCAUGg.................................................... len:21 al:1
.....................GAAUGUAAGAUACUGCCAUGCAUU................................................. len:24 al:1
.....................GAAUGUAAGAUACUGCCAUGCu................................................... len:22 al:2
.....................GAAUGUAAGAUACUGCCAUG..................................................... len:20 al:11
.....................GAAUGUAAGAUACUGCCAUGCAU.................................................. len:23 al:1
.....................GAAUGUAAGAUACUGCCAUGa.................................................... len:21 al:7
.....................GAAUGUAAGAUACUGCCg....................................................... len:18 al:1
.....................GAAUGUAAGAUACcGCCAUGC.................................................... len:21 al:1
.....................GAAUGUAAGAUACUGCCA....................................................... len:18 al:1
.....................GAAUGUAAGgUACUGCCAUGC.................................................... len:21 al:2
.....................GAAUGUAAGAUACUGCCAU...................................................... len:19 al:3
......................AAUGUAAGAUACUGCCAc...................................................... len:18 al:1
......................AAUGUAAGAUACUGCCAUGu.................................................... len:20 al:2
......................AAUGUAAGgUACUGCCAUGC.................................................... len:20 al:1
......................AAUGUAAGAUACUGCCAUGCA................................................... len:21 al:15
......................AAUGUAAGAUACUGCCAUGC.................................................... len:20 al:6
.......................AUGUAAGAUACUGCCAUGC.................................................... len:19 al:5
.......................AUGUAAGAUACUGCCAUG..................................................... len:18 al:2
.......................AUGUAAGAUACUGCCAUGCA................................................... len:20 al:18
.......................AUGUAAGAUACUGCCAUGCAU.................................................. len:21 al:2
........................UGUAAGAUACUGCCAUGa.................................................... len:18 al:1
........................UGUAAGAUACUGCCAUGu.................................................... len:18 al:1
........................UGUAAGAUACUGCCAUGCc................................................... len:19 al:2
........................UGUAAGAUACUGCCAUGCuUUU................................................ len:22 al:1
........................UGUAAGAUACUGCCAUGC.................................................... len:18 al:2
........................UGUAAGAUACUGCCAUGCA................................................... len:19 al:7
......................................AUGCAUUUAGUGUCUGGCAGUAUGUUAUU........................... len:29 al:1
.......................................UGCAUUUAGUGUCUGGCAGUAUGUU.............................. len:25 al:1
.......................................UGCgUUUAGUGUCUGGCAGUAUGUU.............................. len:25 al:1
........................................GCAUUUAGUGUCUGGCAGUAUGUUAUUU.......................... len:28 al:2
........................................GCAUUUAGUGUCUGGCAGUAUGUUAUUUUUC....................... len:31 al:1
.........................................CAUUUAGUGUCUGGCAGUAUGUUAUUUU......................... len:28 al:1
.........................................CAUUUAGUGUCUGGCAGUAUGUUAUUUUU........................ len:29 al:5
..........................................AUUUAGUGUCUGGCAGUcUGUUAUUUUUC....................... len:29 al:1
..........................................AUUUAGUGUCUGGCAGUA.................................. len:18 al:1
..........................................AUUUAGUGUCUGGCAGUAcGUUAUUUUU........................ len:28 al:1
..........................................AUUUAGUGUCUGGCAGUAUGUUAUUUUUCCA..................... len:31 al:3
..........................................AUUUAGUGUCUGGCAGUAUGUUAUUUUUC....................... len:29 al:21
..........................................AUUUAGUGUCUGGCAGUAUGUU.............................. len:22 al:3
..........................................AUUUAGUGUCUGGCAGUAUGUUA............................. len:23 al:1
..........................................AUUUAGUGUCUGGCAGUAUGUUAUUUU......................... len:27 al:5
..........................................AUUUAGUGUCUGGCAGUAUGUUAUUUUU........................ len:28 al:27
..........................................AUUUAGUGUCUGGCAGUAUGUUAUU........................... len:25 al:2
..........................................AUUUAGUGUCUGGCAGUAUGUUAUUU.......................... len:26 al:6
..........................................AUUUAGUGUCcGGCAGUAUGU............................... len:21 al:1
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCCAA.................... len:31 al:66
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCCAg.................... len:31 al:1
...........................................UUUgGUGUCUGGCAGUAUGUUAUUUUU........................ len:27 al:1
...........................................UUUAGUGUCUGGCAGUAUGcUAUUUUUCCAA.................... len:31 al:1
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCaA..................... len:30 al:2
...........................................UUcAGUGUCUGGCAGUAUGUUAUUUUUCCAA.................... len:31 al:1
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCCu..................... len:30 al:1
...........................................UUUAGUGUuUGGCAGUAUGUUAUUUUUCCAA.................... len:31 al:2
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUC....................... len:28 al:4
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUU........................ len:27 al:3
...........................................UUUAGUGUCUGaCAGUAUGUUAUUUUUCCAA.................... len:31 al:2
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCCA..................... len:30 al:17
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCC...................... len:29 al:5
...........................................UUUAGUGUCUGGCAGUAUGUU.............................. len:21 al:1
...........................................UUUgGUGUCUGGCAGUAUGUUAUUUUUCCAA.................... len:31 al:1
...........................................UUUAGUGUCUGGCAGUAUGUUAUUUUUCCAu.................... len:31 al:4
...........................................UUUAGUGUCcGGCAGUAUGUUAUUUUUCCA..................... len:30 al:1
............................................UUAGUGUCUGGCAGUAUGUUAUUUUUCCAAU................... len:31 al:1
.............................................UAGUGUCUGGCAGUAUGUUAUUUUUC....................... len:26 al:1
.............................................UAGUGUCUGGCAGUAUGUUAUUUUUCCAAU................... len:30 al:1
.............................................UAGUGUCUGGCAGUAUGUUAUUUUUCCAA.................... len:29 al:1
.............................................UAGUGUCUGGCAGUAUGUUAUUUUUCCAAUU.................. len:31 al:1
..............................................AGUGUCUGGCAGUAUGUUAUUUUUC....................... len:25 al:1
..............................................AGUGUCUGGCAGUAUGUUAUU........................... len:21 al:1
..............................................AGUGUCUGGCAGUAUGUUAUUU.......................... len:22 al:1
...............................................GUGUCUGGCAGUAUGUUAUUUUUCCAA.................... len:27 al:1
................................................UGUCUGGCAGUAUGUUAUUUUUC....................... len:23 al:1
.................................................cUCUGGCAGUAUGUUAUUUUUCCAAU................... len:26 al:2
.................................................aUCUGGCAGUAUGUUAUUUUUCCA..................... len:24 al:1
.................................................cUCUGGCAGUAUGUUAUUUUUCC...................... len:23 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCgA..................... len:23 al:1
..................................................UCUGGCAGUAUGUUAUaUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUcUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAcGUUAUUUUUCC...................... len:22 al:3
..................................................UCUGGCAGUAUGUUcUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGcAUGUUAUUUUUC....................... len:21 al:4
..................................................UCUGGCAGUAUGUUAUaUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAUGUUAUUUaUCCA..................... len:23 al:1
..................................................UCUaGCAGUAUGUUAUUUUUC....................... len:21 al:4
..................................................UCUGGCAGUAUGUUAUUUUc........................ len:20 al:23
..................................................UCUGGCAGUAUGaUAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAUGUUAcUUUUC....................... len:21 al:5
..................................................UCUGGCAGUAUGcUAUUUUU........................ len:20 al:2
..................................................UCUGGCAGUAUGUUAUUUaUCCAAU................... len:25 al:1
..................................................UCUGGCAGUAcGUUAUUUUU........................ len:20 al:4
..................................................UCUGGCgGUAUGUUAUUUUUCC...................... len:22 al:13
..................................................UCUGGCAGUgUGUUAUUUUUCCAA.................... len:24 al:6
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUUc................. len:27 al:4
..................................................UCcGGCAGUAUGUUAUUUUUCC...................... len:22 al:9
..................................................UCcGGCAGUAUGUUAUUUUUCCAAUUU................. len:27 al:1
..................................................UCUGGCAGUAUGUaAUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCgGUAUGUUAUUUUUC....................... len:21 al:10
..................................................UCUGaCAGUAUGUUAUUUUUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGcAUGUUAUUUUU........................ len:20 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCgAA.................... len:24 al:2
..................................................UCUGGCAGUAcGUUAUUUUUCCAA.................... len:24 al:7
..................................................UCUGGCAGUAUGUUAUUUUUCCg..................... len:23 al:8
..................................................UCUGGCAGUAUGUUAgUUUUCCAAU................... len:25 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCaAAUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUA............................. len:15 al:1
..................................................UCUGGCAGUAUGUUAUUUa......................... len:19 al:3
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUUa................. len:27 al:6
..................................................UCUGGCAGUAUGUUAUUUUUCCAAaUU................. len:27 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAAc................... len:25 al:227
..................................................cCUGGCAGUAUGUUAUUUUU........................ len:20 al:1
..................................................UCUGGCAGcAUGUUAUUUUUCCAAUU.................. len:26 al:4
..................................................UCUGGCAGUgUGUUAUUUUU........................ len:20 al:1
..................................................UCUaGCAGUAUGUUAUUUUUCCAAUU.................. len:26 al:5
..................................................UCUGGCAGUAUGUUAUUUUUCCAc.................... len:24 al:6
..................................................UCUGGCAGUAUGUUAcUUUUCC...................... len:22 al:6
..................................................UCUGaCAGUAUGUUAUUUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAcGUUAUUUUUC....................... len:21 al:6
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUUUu................ len:28 al:3
..................................................UCUGGCAGUAUGUUAcUUUU........................ len:20 al:1
..................................................UCUGGCAGUAUGUUAgUUUUCCAAUU.................. len:26 al:1
..................................................UCUGGCAGUAUaUUAUUUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCu..................... len:23 al:198
..................................................UCUGGCAGUAUGUUAUUUgUC....................... len:21 al:1
..................................................UCUGGCAGUAUGUUgUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUUcA................ len:28 al:1
..................................................UCUGGCAGUAUGUUAUUa.......................... len:18 al:1
..................................................UCUGGCcGUAUGUUAUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCA..................... len:23 al:1035
..................................................UCUGGCAGUAUGUUAUUUUcCCAAU................... len:25 al:18
..................................................UCUGGCAGUAUGUUAUUUcUCCAAU................... len:25 al:11
..................................................UCUGGCAGUAUGUaAUUUUUCC...................... len:22 al:1
..................................................UCUGGCgGUAUGUUAUUUUU........................ len:20 al:2
..................................................UCUGGCAGUAUGcUAUUUUUCCAA.................... len:24 al:2
..................................................UCUGaCAGUAUGUUAUUUUUC....................... len:21 al:5
..................................................UCUGGCcGUAUGUUAUUUUUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:2814
..................................................UCUGGCAGUAUGUUAUUUUUCCAAa................... len:25 al:45
..................................................UCUGGCAGUgUGUUAUUUUUCCA..................... len:23 al:4
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUUUAa............... len:29 al:1
..................................................UCUGGCAGUAUGUUAUUUUcCCAAUUU................. len:27 al:1
..................................................UCUGGCAGUAUGUUAUUUUcCCAA.................... len:24 al:6
..................................................UCUGGCAGUAUGUUAU............................ len:16 al:1
..................................................UCUGGCAGUAUGUUAUUUUUuCAAUU.................. len:26 al:1
..................................................cCUGGCAGUAUGUUAUUUUUCCAAUU.................. len:26 al:6
..................................................UCUGGCAaUAUGUUAUUUUUCCAAU................... len:25 al:1
..................................................UCUGGCAGUAUGUUAUUUUUuC...................... len:22 al:6
..................................................UCUGGCAGUAUGUUAUUUcUCCAA.................... len:24 al:4
..................................................UCUGGCAGaAUGUUAUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUUg........................ len:20 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUg.................. len:26 al:5
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUa.................. len:26 al:69
..................................................UCUGGCAGUAUGUUAcUUUUCCAAU................... len:25 al:5
..................................................UCUGGCAGUAUGUUAUUUU......................... len:19 al:89
..................................................UCcGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:7
..................................................UCUaGCAGUAUGUUAUUUUUCC...................... len:22 al:6
..................................................UCUGGCAGUgUGUUAUUUUUC....................... len:21 al:7
..................................................UCUGGCAGUAUGUUAUUUUcC....................... len:21 al:17
..................................................UCUGGCAGUAUGUcAUUUUUCC...................... len:22 al:4
..................................................UCUGGCcGUAUGUUAUUUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCC...................... len:22 al:2917
..................................................UCUGGCAGUAUGUcAUUUUUCCAAU................... len:25 al:5
..................................................UCUGGCAGUAUGUUAUUUUcCCA..................... len:23 al:3
..................................................UCUGGCAGUAUGUUAaUUUUC....................... len:21 al:1
..................................................UCUGGCgGUAUGUUAUUUUUCCA..................... len:23 al:3
..................................................UCUGGCAGUAaGUUAUUUUUCCAAU................... len:25 al:1
..................................................UCUGGCAGcAUGUUAUUUUUCCAAU................... len:25 al:3
..................................................aCUGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:1
..................................................UCUGGCAGUAUGUcAUUUUUC....................... len:21 al:4
..................................................UCUGGCAGUAUGUUAUUcUUCCAAU................... len:25 al:6
..................................................UCUGGCAGUAUGUUcUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUUcCC...................... len:22 al:4
..................................................UCUGGCAGUAUGUUAUUUUUCCAu.................... len:24 al:26
..................................................UCUGGCAGUAUGUgAUUUUUC....................... len:21 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCuAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUcUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUUa........................ len:20 al:2
..................................................UCUGGCAGUAUGUUAUUUcUCCA..................... len:23 al:3
..................................................UCUGGCAGaAUGUUAUUUUUCC...................... len:22 al:1
..................................................UCUGaCAGUAUGUUAUUUUUCCAAU................... len:25 al:5
..................................................UCUGGCAGUAUGUUgUUUUUC....................... len:21 al:3
..................................................UCUGGCAGUAUaUUAUUUUUCCAAU................... len:25 al:3
..................................................UCUGGCAGUgUGUUAUUUUUCC...................... len:22 al:8
..................................................UCUGGCAGUAcGUUAUUUUUCCA..................... len:23 al:2
..................................................UCUGGCAGUcUGUUAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAUGUUAUUcUUCCAA.................... len:24 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCa...................... len:22 al:56
..................................................UCgGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:2
..................................................UCcGGCAGUAUGUUAUUUUUC....................... len:21 al:15
..................................................UCUGGCAGUAUGUUAcUUUUCCAA.................... len:24 al:1
..................................................UCUGGCcGUAUGUUAUUUUUCCAAU................... len:25 al:3
..................................................UCUGGCAGUAUGUcAUUUUU........................ len:20 al:1
..................................................UCUGGCuGUAUGUUAUUUUU........................ len:20 al:1
..................................................UCUGGCAGUAUGUUgUUUUUCC...................... len:22 al:7
..................................................UCUGGuAGUAUGUUAUUUUUCCA..................... len:23 al:2
..................................................UCUGGCAGUAUGUaAUUUUUC....................... len:21 al:1
..................................................UCUGGCAGUgUGUUAUUUUUCCAAU................... len:25 al:10
..................................................UCUGGuAGUAUGUUAUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUcUUUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCAAaU.................. len:26 al:26
..................................................UCUGGCAGUAUGUUAUUUUU........................ len:20 al:599
..................................................UCUGGCAGUAUGcUAUUUUUC....................... len:21 al:5
..................................................UCUGGCAGUAaGUUAUUUUUCCAAUU.................. len:26 al:1
..................................................UuUGGCAGUAUGUUAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAcGUUAUUUUUCCAAU................... len:25 al:9
..................................................UuUGGCAGUAUGUUAUUUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAUGUUAUUUcUC....................... len:21 al:3
..................................................UCUGGCAGUAUGUUAUUUUUCCgAUU.................. len:26 al:3
..................................................UCUGGCAGUAUGUUgUUUUUCCAAU................... len:25 al:10
..................................................UCcGGCAGUAUGUUAUUUUUCCAA.................... len:24 al:4
..................................................UCUGGCAGUAUGcUAUUUU......................... len:19 al:1
..................................................UCaGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCAuUU.................. len:26 al:1
..................................................UCUGGCAGUAUGUUAUUUUUC....................... len:21 al:3562
..................................................cCUGGCAGUAUGUUAUUUUUC....................... len:21 al:8
..................................................UCUGGCAGUAUGUUAUcUUUC....................... len:21 al:5
..................................................UCUGGCAGUAUGUUAcUUUUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUAUUUUUuCAAU................... len:25 al:2
..................................................UCUGGCAaUAUGUUAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUcUGUUAUUUUUC....................... len:21 al:2
..................................................UCUGGCAGUAUGaUAUUUUUC....................... len:21 al:1
..................................................UCUGaCAGUAUGUUAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAUGaUAUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCaAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUc......................... len:19 al:4
..................................................UCUGGCAGUAUGUUAUcUUUCCAA.................... len:24 al:1
..................................................cCUGGCAGUAUGUUAUUUUUCCA..................... len:23 al:3
..................................................cCUGGCAGUAUGUUAUUUUUCC...................... len:22 al:5
..................................................UuUGGCAGUAUGUUAUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAcUU.................. len:26 al:2
..................................................UCUGGCAGUAcGUUAUUUUUCCAAUU.................. len:26 al:6
..................................................UCUGGCgGUAUGUUAUUUUUCCAAU................... len:25 al:11
..................................................UCUGGCAGUAUGUUAUUUUUCCAgUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUAUUcUUCCA..................... len:23 al:7
..................................................UCUGGCAGUAUGUUAUUUcUCC...................... len:22 al:3
..................................................UCUGGCAGUAUGUUAUUUUUCCgAU................... len:25 al:3
..................................................UCUGGCAGUAUGUUAUUUUUCCAAgU.................. len:26 al:1
..................................................UCUGGuAGUAUGUUAUUUUUC....................... len:21 al:6
..................................................UCUGGCAGUAUGUUcUUUUUC....................... len:21 al:5
..................................................UCUGGCAGaAUGUUAUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCAgU................... len:25 al:15
..................................................UCgGGCAGUAUGUUAUUUUUCC...................... len:22 al:1
..................................................UCUGGCAGUAUGUUcUUUUUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCgA.................... len:24 al:2
..................................................UCUGGuAGUAUGUUAUUUUUCCAAU................... len:25 al:6
..................................................UCUGGCAGUAUGUUAUUUUUa....................... len:21 al:9
..................................................UuUGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUU.................. len:26 al:1425
..................................................UCcGGCAGUAUGUUAUUUUUCCA..................... len:23 al:4
..................................................UCUGGCAGUAUGUUAUUUUUCCAAcU.................. len:26 al:19
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUUU................. len:27 al:33
..................................................UCUGGCAGUAUGUUAUUUUUCaA..................... len:23 al:2
..................................................UCUGGCcGUAUGUUAUUUUUC....................... len:21 al:1
..................................................UCUGGCAGUAUGcUAUUUUUCCA..................... len:23 al:3
..................................................UCUGGCcGUAUGUUAUUUUUCCA..................... len:23 al:2
..................................................gCUGGCAGUAUGUUAUUUUUCCAAUU.................. len:26 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCu...................... len:22 al:184
..................................................UCUGGCAGUAUGUUAUUUg......................... len:19 al:1
..................................................UCUGGCAGUgUGUUAUUUUUCCAAUU.................. len:26 al:5
..................................................UCUGGCAGUAUGUUAUcUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAUGUUAcUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAUGUUAUgUUUC....................... len:21 al:1
..................................................UCUGGCAGUAUGUUAUUcUUCCAAUU.................. len:26 al:3
..................................................UCUGGCAGUcUGUUAUUUUUCC...................... len:22 al:3
..................................................UCUGGCAGUAUGUcAUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUcUUC....................... len:21 al:2
..................................................UCUGGCAGUcUGUUAUUUUUCCAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUcU........................ len:20 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAg.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCuA..................... len:23 al:3
..................................................UCUGGCAGUAUGcUAUUUUUCCAAUU.................. len:26 al:5
..................................................UCUGGCAGUAUGUUAUUUUcCCAAUU.................. len:26 al:5
..................................................UCUGGCAGUAUGUUAUUUUUCuAA.................... len:24 al:2
..................................................UCUGGCAGUAaGUUAUUUUUCC...................... len:22 al:1
..................................................UCUGGCAGUAUGUUAUUUUaCCAAU................... len:25 al:1
..................................................UCcGGCAGUAUGUUAUUUUUCCAAUU.................. len:26 al:3
..................................................UCUGGCAGUAUGUUAUUUUgCCAAU................... len:25 al:1
..................................................UCUGGCgGUAUGUUAUUUUUCCAAUU.................. len:26 al:3
..................................................UCUGaCAGUAUGUUAUUUUUCCAA.................... len:24 al:1
..................................................UCaGGCAGUAUGUUAUUUUUC....................... len:21 al:3
..................................................UCUGGCAGUAUGUUAUUUUUCCAAg................... len:25 al:12
..................................................UCUGGCAGUAUGUUgUUUUUCCAAUU.................. len:26 al:2
..................................................UCUGGuAGUAUGUUAUUUUUCCAAUU.................. len:26 al:3
..................................................UCUGGuAGUAUGUUAUUUUUCC...................... len:22 al:3
..................................................UuUGGCAGUAUGUUAUUUUUC....................... len:21 al:5
..................................................UCUGGCAGcAUGUUAUUUUUCC...................... len:22 al:2
..................................................UCUGGCAGUAUGUUAUUUUUu....................... len:21 al:28
..................................................cCUGGCAGUAUGUUAUUUUUCCAA.................... len:24 al:2
..................................................UCUGGCAGUAUGcUAUUUUUCCAAU................... len:25 al:13
..................................................UCUGGCAGUAUGcUAUUUUUCC...................... len:22 al:3
..................................................UCUGGCAGUAUGUUAUUUgUCC...................... len:22 al:1
..................................................UCUGGCAaUAUGUUAUUUUUCC...................... len:22 al:1
..................................................UCUGGCAGUcUGUUAUUUUUCCAAU................... len:25 al:5
..................................................UCUGGCAGUAUGUUAUUUUUCCAA.................... len:24 al:808
..................................................UCUGGCAGUAUGUcAUUUUUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGUAUGUUAUUUUUCCAuU................... len:25 al:34
..................................................UCUGGCAGUAUGUUAUU........................... len:17 al:9
..................................................UCUaGCAGUAUGUUAUUUUUCCAAU................... len:25 al:2
..................................................UCUGGCAGUAUGUUAUUU.......................... len:18 al:56
..................................................UCUGGCAGUAUGUUAUUUcUCCAAUU.................. len:26 al:2
..................................................UCUGGCAGcAUGUUAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAAUc.................. len:26 al:77
..................................................cCUGGCAGUAUGUUAUUUUUCCAAU................... len:25 al:15
..................................................gCUGGCAGUAUGUUAUUUUUC....................... len:21 al:1
..................................................UCUGGCAGUAUGUUAUUcUUCC...................... len:22 al:7
..................................................UCUGGCAGUAUGUcAUUUUUCCA..................... len:23 al:1
..................................................UCUGGCAGUAUGUUAUUUaU........................ len:20 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCaAA.................... len:24 al:1
..................................................UCUGGCAGUAUGUUAUUUUUCCAcU................... len:25 al:21
...................................................CUGGCAGUAUGUUAUUUUUCCAAUUc................. len:26 al:1
...................................................CUGGCAGUAUGUUAUUUUU........................ len:19 al:3
...................................................CUGGCAGUAUGUUAUUUUUCCAAUU.................. len:25 al:32
...................................................CUGGCAGUAUGUUAUUUUUCCAAUc.................. len:25 al:1
...................................................CUGGCAGUAUGUUAUUUU......................... len:18 al:1
...................................................CUGGCAGUAUGUUAUUUUUCCAAUUU................. len:26 al:1
...................................................CUGGCAGUAUGUUAUUUUUCCAAU................... len:24 al:14
...................................................CUGGCAGUAUGUUAUUUUUCCAuU................... len:24 al:2
...................................................CUGGCAGUAUGUUAUUUUUCCAA.................... len:23 al:2
...................................................CUGGCAGUAUGUUAUUUUUCCAAUUUu................ len:27 al:1
...................................................CUGGCAGUAUGUUAUUUUUCC...................... len:21 al:4
...................................................CUGGCAGUAUGUUAUUUcUCCAAUU.................. len:25 al:1
...................................................CUGGCAGUAUGUUAUUUUUCCAAaUU................. len:26 al:2
...................................................CUGGCAGUAUGUUAUUUUUCCAuUU.................. len:25 al:1
...................................................CUGGCAGUAUGUUAUUUUUCCAu.................... len:23 al:1
...................................................CUGGCAGUAUGUUAUUcUUCCAAUU.................. len:25 al:2
...................................................CUGGCAGUAUGUUAUUUUUCCAAc................... len:24 al:2
...................................................CUGGCAaUAUGUUAUUUUUCCAAUU.................. len:25 al:1
...................................................CUGGCAGUAUGUUAUUUUUC....................... len:20 al:6
....................................................UGGCAGUAUGUUAUUUUUCCAAUU.................. len:24 al:1
....................................................UGGCAGUAUGUUAUUUUUCCAAU................... len:23 al:1
....................................................UGGCAGUAUGUUAUUUUUC....................... len:19 al:4
....................................................UGGCAGUAUGUUAUUUUUCCAA.................... len:22 al:2
.....................................................GGCAGUAUGUUAUUUUUCCAAU................... len:22 al:1