Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: ptg000025l:11346066-11346157 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/04-Apul-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_14633.ps.pdf
Locus Name: Cluster_14633
AGUCUAUAGCAGUUAUUUUGUACUCAAUCUUGUUUUAAUAAAUUUAUUAUUAUUGAAAUAAGAUUGGAUAUAAAAUUGAAGGAACACUCAGU
..............((((((((.((((((((((((((((((........)))))))))))))))))).))))))))(((.(.....)))).. (-22.20)
....................UACUCAAUCUUGUUUUAAUA.................................................... len:20 al:2
....................UACUCAAUCUUGUUUUAAUAAA.................................................. len:22 al:1
....................UACUCAAUCUUGUUUUAAUAAAU................................................. len:23 al:1
..................................................UAUUGAAAUAAGAUUGGAUAU..................... len:21 al:1
..................................................UAUUGAAAUAAGAUUGGAUAUA.................... len:22 al:1
..................................................UAUUGAAAUAAGAUUGGAc....................... len:19 al:2
..................................................UAUUGAAAUAAGAUUGGAUAc..................... len:21 al:1
..................................................UAUUGAAAUAAGAUUGGAUAUu.................... len:22 al:2
..................................................UAUUGAAAUAAGAUUGGAU....................... len:19 al:18
..................................................UAUUGAAAUAAGAUUGGAUA...................... len:20 al:2
...................................................AUUGAAAUAAGAUUGGAUA...................... len:19 al:1
...................................................AUUGAAAUAAGAUUGGAU....................... len:18 al:1