Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000024l:5256454-5256549 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/D-Apul/output/11-Apul-sRNA-ShortStack_4.1.0-pulchra_genome/ShortStack_out/strucVis/Cluster_13614.ps.pdf
Locus Name: Cluster_13614
GGCAUCUGUGAACUCCAGCCUACAUGUGCUGCACUGGAACUCUUUAGCAAGACAUUCCAUGGCAGCUGUGUGCGCUAGGGCUUCACCUUUUUCAGG
.......(((((.((((((.((((((.(((((..(((((.((((....))))..)))))..))))))))))).))).))).))))).......... (-33.10)
GGCAUCUGUGAAuUCCAGCC............................................................................ len:20 al:2
GGCAUCUGUGAACUCCAGCC............................................................................ len:20 al:5
GGCAUCUGUGAACUCCgGCC............................................................................ len:20 al:1
GGCAUCUGUGAACUCCcGCC............................................................................ len:20 al:1
GGCAUCUGUGAACUCCAGCCa........................................................................... len:21 al:3
GGCAUCUGUGAACUCCAGCu............................................................................ len:20 al:3
GGCAUCUGUGAACUCCAGCa............................................................................ len:20 al:1
.GCAUCUGUGAACUCCAGCu............................................................................ len:19 al:19
.GCAUCUGUGAACUCCAGC............................................................................. len:18 al:1
.GCgUCUGUGAACUCCAGCC............................................................................ len:19 al:1
.GCAUCUGUGAACUCCAGCa............................................................................ len:19 al:2
.GCAUCUGUGAACUCCAGCg............................................................................ len:19 al:1
.GCAUCUGUGAACUCCAGCC............................................................................ len:19 al:50
.GCAUCUGUGAACUCCAGCCa........................................................................... len:20 al:2
..CuUCUGUGAACUCCAGCC............................................................................ len:18 al:1
..CAUCUGUGAACUCCAGCa............................................................................ len:18 al:2
..CAUCUGUGAACUCCAGCu............................................................................ len:18 al:1
..CAUCUGUGAACUCCAGCC............................................................................ len:18 al:21
...AUCUGUGAACUCCAGCC............................................................................ len:17 al:1
...................CUACAUGUGCUGCACUGGAACUC...................................................... len:23 al:2
...................CUACAUGUGCUGCACUGGAACUCU..................................................... len:24 al:3
...................CUACAUGUGCUGCACUGGA.......................................................... len:19 al:2
...................CUACAUGUGCUGCACUGGAACUCUUUAGC................................................ len:29 al:1
...................CUACAUGUGCUGCACUGGAACU....................................................... len:22 al:4
....................UACAUGUGCUGCACUGGAACUCUcU................................................... len:25 al:6
....................UACAUGUGCUGCACcGGA.......................................................... len:18 al:1
....................UACAUGUGCUGCACaGGAACUCU..................................................... len:23 al:3
....................UACAaGUGCUGCACUGGAACU....................................................... len:21 al:3
....................UACAUGUGCUGCACUGGAACUC...................................................... len:22 al:574
....................UACAUGcGCUGCACUGGAACUCUUU................................................... len:25 al:1
....................UuCAUGUGCUGCACUGGAACUCU..................................................... len:23 al:4
....................UACAUGUGCUGCACUGa........................................................... len:17 al:2
....................UACAUGUGCUGCACcGGAACUCUUUAGC................................................ len:28 al:1
....................UACAUGUGCUGCACUuGAACUC...................................................... len:22 al:1
....................UACAUGUGCUGCACUaGAACUC...................................................... len:22 al:1
....................UACAUGUGuUGCACUGGAACUCU..................................................... len:23 al:10
....................UACAUGUGCUGCACUGGA.......................................................... len:18 al:443
....................UACAUGUGCUGCACUGGAACUa...................................................... len:22 al:23
....................UACcUGUGCUGCACUGGAACUCU..................................................... len:23 al:9
....................UgCAUGUGCUGCACUGGAA......................................................... len:19 al:1
....................UACAUGUGCUGCACUGGAACcCUU.................................................... len:24 al:1
....................UACAUGUGaUGCACUGGAACUCU..................................................... len:23 al:1
....................UACAUGUGCUGCAuUGGAACUC...................................................... len:22 al:1
....................UACAgGUGCUGCACUGGAACUCU..................................................... len:23 al:1
....................UACAUaUGCUGCACUGGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGGAACUCU..................................................... len:23 al:6711
....................UACAUGUGCUGCACcGGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGGAACUCcUU................................................... len:25 al:1
....................UACAUGUGCUGCACcGGAACU....................................................... len:21 al:9
....................UACAUGUGCcGCACUGGAACUC...................................................... len:22 al:3
....................UACAUGUGCUGCACUaGAACUCU..................................................... len:23 al:10
....................UACAUGUGuUGCACUGGAACUCUU.................................................... len:24 al:2
....................UACAUGUGCUGCACaGGAACUCUU.................................................... len:24 al:2
....................UACAUGUGCUGaACUGGAAC........................................................ len:20 al:1
....................UACAUGUGCUGCACUGGAAuU....................................................... len:21 al:3
....................UACAUGUGCUGCACUGGAACUCgU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGGAACa....................................................... len:21 al:182
....................UACAUGUGCUaCACUGGAAC........................................................ len:20 al:1
....................UACAUGUGCUGuACUGGAACUCU..................................................... len:23 al:9
....................UACAUGUGCUGCACUGGAACUCUUc................................................... len:25 al:22
....................UACuUGUGCUGCACUGGAACUCUUU................................................... len:25 al:1
....................UACAUGUaCUGCACUGGAACU....................................................... len:21 al:3
....................UACAUGcGCUGCACUGGA.......................................................... len:18 al:3
....................UACAUGUGuUGCACUGGAAC........................................................ len:20 al:1
....................UACgUGUGCUGCACUGGAAC........................................................ len:20 al:2
....................UACAUGUGCUGCACUGGuACUCU..................................................... len:23 al:1
....................UACAUGUGCcGCACUGGAA......................................................... len:19 al:2
....................UACAUGUGCUaCACUGGAACU....................................................... len:21 al:3
....................UACAUGUGCUGCACUGGgACUCUUU................................................... len:25 al:3
....................UACAUGUGCUGCACUGGAgCU....................................................... len:21 al:18
....................cACAUGUGCUGCACUGGAACUC...................................................... len:22 al:1
....................UACAUGUGCUGCACUGGAACUCUaUA.................................................. len:26 al:31
....................UACAUGUGCUGCACUGGAAuUCUU.................................................... len:24 al:3
....................UACAUGUGCUGCACUGGuA......................................................... len:19 al:1
....................UgCAUGUGCUGCACUGGA.......................................................... len:18 al:1
....................UACAUGUGCUGCACUGaAACUCU..................................................... len:23 al:2
....................UACAUGgGCUGCACUGGAACUCU..................................................... len:23 al:3
....................cACAUGUGCUGCACUGGAACUCUUU................................................... len:25 al:1
....................UACAUGUGCUGCACUGGgACUC...................................................... len:22 al:2
....................UACAUGUGCUGCACUGGgACUCU..................................................... len:23 al:24
....................UACAUGUGCUGCACcGGAAC........................................................ len:20 al:4
....................UACAUGUGCUGCACUGGAAgU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGu.......................................................... len:18 al:5
....................UACAUGUGCUuCACUGGAACUC...................................................... len:22 al:2
....................UACAUGUGCUGCACUGGAACUCUUUc.................................................. len:26 al:3
....................UACAUGUGCUaCACUGGAACUC...................................................... len:22 al:1
....................UACAUGUGCUGCACUGGgACU....................................................... len:21 al:12
....................UACAUGcGCUGCACUGGAACU....................................................... len:21 al:5
....................UACAUGUGCUGCACU............................................................. len:15 al:10
....................UACAUGUGCUGCACUGGAACUCg..................................................... len:23 al:69
....................UACAUGUGCUGCACUGGAACUCaU.................................................... len:24 al:159
....................UACcUGUGCUGCACUGGAAC........................................................ len:20 al:1
....................UAuAUGUGCUGCACUGGAACU....................................................... len:21 al:3
....................UACAUGUGCUaCACUGGAACUCUUU................................................... len:25 al:1
....................UACAUGUGCUGCgCUGGAACUCUU.................................................... len:24 al:2
....................UACAUGUGCUGCACUGGAACaCU..................................................... len:23 al:6
....................UACAUGUGCUGCACUGGAA......................................................... len:19 al:81
....................cACAUGUGCUGCACUGGA.......................................................... len:18 al:2
....................UACAUGUGCUGCACUGGuACU....................................................... len:21 al:1
....................UACAUGUGCcGCACUGGAACUCUUU................................................... len:25 al:2
....................UACAUGUGCUGCACUGGAACgC...................................................... len:22 al:2
....................UcCAUGUGCUGCACUGGAAC........................................................ len:20 al:1
....................UACAUGcGCUGCACUGGAACUC...................................................... len:22 al:1
....................UgCAUGUGCUGCACUGGAACUC...................................................... len:22 al:3
....................UACAUGUGCUGCACc............................................................. len:15 al:3
....................UACcUGUGCUGCACUGGAACUC...................................................... len:22 al:1
....................UACAUGUGCUGCACUGGAACUCUUUuGC................................................ len:28 al:4
....................UACAUGUGCcGCACUGGAACUCUU.................................................... len:24 al:4
....................cACAUGUGCUGCACUGGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGGAuCU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGAACUu...................................................... len:22 al:78
....................UACAUGUGCcGCACUGGAACUCU..................................................... len:23 al:36
....................UACAUGUGCUGCACUGGc.......................................................... len:18 al:1
....................UgCAUGUGCUGCACUGGAACUCUU.................................................... len:24 al:2
....................UACAUGUcCUGCACUGGAACU....................................................... len:21 al:1
....................UACAUGUGCUcCACUGGAACU....................................................... len:21 al:1
....................UACuUGUGCUGCACUGGAACUCU..................................................... len:23 al:2
....................UACAUGUGCUGCACUGGAACcC...................................................... len:22 al:5
....................UACAUGUGCUGCACUGGAAC........................................................ len:20 al:458
....................UACAUGUGCUGCACUGGAACUCcU.................................................... len:24 al:3
....................UACAUGUGCUGCACUGGAACUCUUUAGC................................................ len:28 al:10
....................UACAUGUGCUGCACUGGAACcCU..................................................... len:23 al:34
....................UACAUGUGCUGCACUGGAuC........................................................ len:20 al:1
....................UACAUGUGCUGCACUGGAACUCUUaA.................................................. len:26 al:4
....................UACAUGUGCUGCACaGGAAC........................................................ len:20 al:1
....................cACAUGUGCUGCACUGGAACUCU..................................................... len:23 al:21
....................UACAUGUGCUGCACUGGAACgCU..................................................... len:23 al:1
....................UACAUGUGCUGCcCUGGAACUCUU.................................................... len:24 al:1
....................UACAcGUGCUGCACUGGAACUCUU.................................................... len:24 al:6
....................UACAUGUGCUGCACUGaAACUCUUU................................................... len:25 al:2
....................UACAUGUGCUGuACUGGAAC........................................................ len:20 al:2
....................UACAUGUGCUaCACUGGA.......................................................... len:18 al:2
....................UACAUGUGCUGCACgGGAACUCU..................................................... len:23 al:1
....................aACAUGUGCUGCACUGGAACUCU..................................................... len:23 al:4
....................UACcUGUGCUGCACUGGAACU....................................................... len:21 al:2
....................UACAUGUGCUGCACUGGAgCUC...................................................... len:22 al:1
....................UACAUGUaCUGCACUGGAACUCU..................................................... len:23 al:10
....................UACAUGUGCUGCACUGGAACUCUc.................................................... len:24 al:67
....................UACAUGUGCUGCACUGGuACUC...................................................... len:22 al:1
....................UgCAUGUGCUGCACUGGAAC........................................................ len:20 al:1
....................UACAUGUGCUGCAuUGGAACU....................................................... len:21 al:2
....................UACAUGUaCUGCACUGGAAC........................................................ len:20 al:1
....................UACAUGUGCUGCAaUGGAACU....................................................... len:21 al:1
....................gACAUGUGCUGCACUGGAACU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGAACUCaUU................................................... len:25 al:85
....................UACAUGUGCUGCACUGGAACUaU..................................................... len:23 al:6
....................UACAUGUGCUGCACUGGAACUCUUU................................................... len:25 al:190
....................UACAUGUGCUGuACUGGAACU....................................................... len:21 al:1
....................UACAUuUGCUGCACUGGAACUCU..................................................... len:23 al:2
....................UACAUGUGCUGCACUGGAACUCUg.................................................... len:24 al:8
....................UACAUGUGCUGCACUGGAgCUCU..................................................... len:23 al:19
....................UACAUGUGCUGCACUuGAACUCU..................................................... len:23 al:1
....................UACAUGUGCUGCACcGGAACUC...................................................... len:22 al:2
....................UACAUGUGCUGCACUGcA.......................................................... len:18 al:3
....................UACgUGUGCUGCACUGGAACU....................................................... len:21 al:3
....................UACAUGUGCUGCACUGGAu......................................................... len:19 al:8
....................UACAUGUGCUGCAuUGGAACUCU..................................................... len:23 al:8
....................UACAUGUGCcGCACUGGA.......................................................... len:18 al:3
....................UACAUGUGCUGCACUGGAACUCUUUAGCAAG............................................. len:31 al:2
....................UACAUGUGCUGCgCUGGAACUCU..................................................... len:23 al:22
....................UACAUGUGCUGCACUGGAAu........................................................ len:20 al:36
....................UACgUGUGCUGCACUGGAACUCU..................................................... len:23 al:26
....................UACAUGUGCUGCACUGGAcCUCUU.................................................... len:24 al:1
....................UACAUGaGCUGCACUGGAACUCU..................................................... len:23 al:1
....................UACgUGUGCUGCACUGGAACUCUUU................................................... len:25 al:3
....................UACAcGUGCUGCACUGGAACU....................................................... len:21 al:14
....................UACAUGUGCUGCACUGGg.......................................................... len:18 al:6
....................UACAUGUGCUGCgCUGGA.......................................................... len:18 al:1
....................UACAUGUGCaGCACUGGAACUCU..................................................... len:23 al:3
....................UACAUGUGCUGCACUGGAACUCUa.................................................... len:24 al:284
....................UACAUGUGCUGCACUuGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGGAACUg...................................................... len:22 al:2
....................UACAUGUGCUGCcCUGGAACUCU..................................................... len:23 al:3
....................UACAUGUGCUGCACUG............................................................ len:16 al:2
....................UACAUGUGCUGCACUGGAcCUCU..................................................... len:23 al:4
....................UAuAUGUGCUGCACUGGAACUC...................................................... len:22 al:2
....................UACAUGUGCUGCACUGGAACUCUaU................................................... len:25 al:159
....................UACAUGUGCUGCACUGGAACg....................................................... len:21 al:24
....................UACAUGUGCUcCACUGGAACUCUUU................................................... len:25 al:1
....................UACAUGUGCUGCcCUGGAACU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGaAACUC...................................................... len:22 al:1
....................UcCAUGUGCUGCACUGGAACUCU..................................................... len:23 al:7
....................UAuAUGUGCUGCACUGGA.......................................................... len:18 al:1
....................UACAUGUGCUGCACUGGAACUuUU.................................................... len:24 al:2
....................UACAUGUGCUGCACUGGAgCUCUU.................................................... len:24 al:3
....................UACAcGUGCUGCACUGGAACUCU..................................................... len:23 al:23
....................UACAUGUGCUGCACUGaAACUCUU.................................................... len:24 al:2
....................UACAUGcGCUGCACUGGAACUCU..................................................... len:23 al:27
....................UACAgGUGCUGCACUGGAACU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGAACUuU..................................................... len:23 al:14
....................aACAUGUGCUGCACUGGAACU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGAACUCUUUAGa................................................ len:28 al:1
....................UACAUGUGCUGCACUaGAACUCUU.................................................... len:24 al:1
....................UACAUGUGuUGCACUGGAACU....................................................... len:21 al:2
....................UACAcGUGCUGCACUGGAACUC...................................................... len:22 al:3
....................UACAUGcGCUGCACUGGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCAuUGGAAC........................................................ len:20 al:1
....................UACAUGUGCUGCACUGGAAaU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGAACUCaUUA.................................................. len:26 al:2
....................UACAUGUGCUGCACUGGAACUCa..................................................... len:23 al:704
....................UACAUGUGCcGCACUGGAACU....................................................... len:21 al:10
....................UACAUGUGCUGCACUGGAACc....................................................... len:21 al:256
....................UACAUGUGgUGCACUGGAACU....................................................... len:21 al:2
....................UACAUGUGCUaCACUGGAACUCU..................................................... len:23 al:12
....................UACAUGUGCUGCACUGGAACUCUUa................................................... len:25 al:46
....................UACAUGgGCUGCACUGGAACU....................................................... len:21 al:1
....................UACAUGUGCUGCACUGGAAuUCU..................................................... len:23 al:6
....................UACAUGUGCUGCACUGGAAa........................................................ len:20 al:5
....................UACAUGUGCUGCACUGGAACUCUUUAG................................................. len:27 al:1
....................UACgUGUGCUGCACUGGAACUCUU.................................................... len:24 al:4
....................UACAUGUGCcGCACUGGAAC........................................................ len:20 al:2
....................UACAUGUGCUGuACUGGA.......................................................... len:18 al:1
....................UACAUGUGCUGCACUGGcACUCU..................................................... len:23 al:2
....................UACAUGUGCaGCACUGGAACU....................................................... len:21 al:4
....................UACAUGUGCUGCAaUGGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGG........................................................... len:17 al:5
....................UACAUGUGCUGCACUGGgACUCUU.................................................... len:24 al:2
....................UACAUGUGCUGCACUGGuACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGaA.......................................................... len:18 al:1
....................UgCAUGUGCUGCACUGGAACUCU..................................................... len:23 al:9
....................UACAUGUGCUaCACUGGAACUCUU.................................................... len:24 al:1
....................UACAUGUGCUGCACUGGAACUCUUUA.................................................. len:26 al:14
....................UACAUGUGCUGCACUGGAgC........................................................ len:20 al:1
....................cACAUGUGCUGCACUGGAACU....................................................... len:21 al:5
....................UACcUGUGCUGCACUGGA.......................................................... len:18 al:1
....................UAuAUGUGCUGCACUGGAACUCU..................................................... len:23 al:1
....................UACAUGUGCUGCACUGGAACUCUUUu.................................................. len:26 al:72
....................UACAUGUGCUGCACUGGAACUCc..................................................... len:23 al:855
....................UACAUGUuCUGCACUGGAACUCU..................................................... len:23 al:1
....................UACAUGUGCUGCgCUGGAACU....................................................... len:21 al:6
....................UACAUGcGCUGCACUGGAAC........................................................ len:20 al:2
....................UACAUGUGCUGCACUGGAACU....................................................... len:21 al:2213
....................UACAUGUGCUGCACUaGAACU....................................................... len:21 al:5
....................UACAUGUGCUGCACUGGAACUCUU.................................................... len:24 al:770
....................UACAUGUGCUGCACUGGAACUCUUUAGCAA.............................................. len:30 al:2
....................UACAcGUGCUGCACUGGA.......................................................... len:18 al:1
....................UACAUGUGCUGCACcGGAACUCU..................................................... len:23 al:11
....................UACAcGUGCUGCACUGGAACUCUUU................................................... len:25 al:1
....................UACAUGUGCUGCAaUGGAACUCU..................................................... len:23 al:4
....................UACAUaUGCUGCACUGGAACU....................................................... len:21 al:3
....................UcCAUGUGCUGCACUGGAACU....................................................... len:21 al:2
....................UACAUGUGCUGCACUGGAACUCUUUAGCA............................................... len:29 al:3
....................UACAUGUGCUGCACUGGAACUaUU.................................................... len:24 al:1
....................UACAUGUGCUGCgCUGGAACUC...................................................... len:22 al:4
....................UACAUaUGCUGCACUGGAACUCU..................................................... len:23 al:7
....................UgCAUGUGCUGCACUGGAACU....................................................... len:21 al:7
....................UACAUGUGCUGgACUGGAACUCU..................................................... len:23 al:1
....................UcCAUGUGCUGCACUGGA.......................................................... len:18 al:2
....................UACAUGUGCUGCACUGGgAC........................................................ len:20 al:3
....................UACAUGUGCUGCACaGGAACU....................................................... len:21 al:2
....................UACAUGUGCUGCACUGGAACUuUUU................................................... len:25 al:2
....................UACAUGUGCUGCAuUGGAACUCUUU................................................... len:25 al:1
....................UACAUGUGCgGCACUGGAACU....................................................... len:21 al:1
.....................ACAUGUGCUGCACUGGAACUCc..................................................... len:22 al:1
.....................ACAUGUGCUGCACUGGAACUCU..................................................... len:22 al:15
.....................ACAUGUGCUGCACUGGAACUCUU.................................................... len:23 al:1
.....................ACAUGUGCUGCACUGGAACUCg..................................................... len:22 al:2
.....................ACAUGUGCUGCACUGGAACc....................................................... len:20 al:2
.....................ACAUGUGCUGCACUGGAACUC...................................................... len:21 al:2
.....................ACAUGUGCUGCACUGGAACUCa..................................................... len:22 al:2
.....................ACAUGUGCUGCACUGGAACU....................................................... len:20 al:10
.....................ACAUGUGCUGCACUGGAAC........................................................ len:19 al:5
.....................ACAUGUGCUGCACUGGAACcC...................................................... len:21 al:2
......................CAUGUGCUGCACUGGAACUC...................................................... len:20 al:2
......................CAUGUGCUGCACUGGAACU....................................................... len:19 al:5
......................CAUGUGCUGCACUGGAACUCg..................................................... len:21 al:1
......................CAUGUGCUGCACUGGAACUCU..................................................... len:21 al:5
.......................AUGUGCUGCACUGGAACUCU..................................................... len:20 al:15
.......................AUGUGCUGCACUGGAACUCUU.................................................... len:21 al:1
.......................AUGUGCUGCACUGGAAC........................................................ len:17 al:1
.......................AUGUGCUGCACUGGAACUCa..................................................... len:20 al:1
.......................AUGUGCUGCACUGGAACUC...................................................... len:19 al:2
.......................AUGUGCUGCACUGGAACU....................................................... len:18 al:7
.......................AUGUGCUGCACUGGAACc....................................................... len:18 al:2
.......................AUGUGCUGCACUGGAACUCg..................................................... len:20 al:1
.......................AUGUGCUGCACUGGAACUCc..................................................... len:20 al:2
........................UGUGCUGCACUGGAACUC...................................................... len:18 al:16
........................UGUGCUGCACUGGAACUCUc.................................................... len:20 al:1
........................UGUGCUGCACUGGAACUCaUU................................................... len:21 al:1
........................UGUGCUGCACUGGAACUCc..................................................... len:19 al:13
........................UGUGCUGCACUGGAACUCg..................................................... len:19 al:1
........................UGUGCUGCACUGGAACUCaU.................................................... len:20 al:12
........................UGUGCUGCACUGGAACUCUU.................................................... len:20 al:9
........................UGUGCUGCACUGGAACUa...................................................... len:18 al:1
........................UGUGuUGCACUGGAACUCU..................................................... len:19 al:1
........................UGUGCUGCACUGGAACUCUUa................................................... len:21 al:4
........................UGUGCUGCgCUGGAACUC...................................................... len:18 al:1
........................UGUGCUGCACUGGAACUCUaU................................................... len:21 al:1
........................UaUGCUGCACUGGAACUCU..................................................... len:19 al:1
........................UGUGCUGCACUGGAACUCa..................................................... len:19 al:58
........................UGUGCUGCACUGGAACUCU..................................................... len:19 al:119
........................UGUGCUGCACUGGAACUCUa.................................................... len:20 al:4
.................................CUGGAACUCUUUAGCAAGACAUUCa...................................... len:25 al:1
.................................CUGGAACUCUUUAGCAAGACA.......................................... len:21 al:2
..................................UGGAACUCUUUAGCAAGACA.......................................... len:20 al:3
..................................UGGAACUCUUUAGCAAGACAUUa....................................... len:23 al:1
.........................................CUUUAGCAAGACAUUCCAUGGCAGCa............................. len:26 al:2
.........................................CUUUAGCAAGACAUUCCAUGGCAGCUGU........................... len:28 al:7
.........................................CUUUAGCAAGACAUUCCAUGGCAGCUGUGU......................... len:30 al:4
.........................................CUUUAGCAAGACAUUCCAUGGCAGCUGUGUG........................ len:31 al:1
..........................................UUUAGCAAGACAUUCCAUGGCAGCUGU........................... len:27 al:2
..........................................UUUAGCAAGACAUUCCAUGGCAGCUGUGU......................... len:29 al:1
...........................................UUAGCAAGACAUUCCAUGGuAGCUGUGUGCG...................... len:31 al:2
...........................................UUAGCAAGACAUUCCAUaGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUa........................ len:29 al:1
...........................................UUAGCgAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:4
...........................................UUAGCAAGACcUUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGCa...................... len:31 al:234
...........................................UUuGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:34
...........................................UUAGCAAGACAUUCCAUGGCAGuUGUGUGCG...................... len:31 al:2
...........................................UUAGCAgGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UcAGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:4
...........................................UUuGCAAGACAUUCCAUGGCAGCUGUGUGC....................... len:30 al:8
...........................................UUAGCAAGACAUUCCAcGGCAGCUGUGUGCG...................... len:31 al:2
...........................................UUAGuAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:5
...........................................UUgGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:2
...........................................UUAGCAAGACAaUCCAUGGCAGCUGUGUGCG...................... len:31 al:2
...........................................UUAGCAAGACAUUCCAUGGCgGCUGUGUGCG...................... len:31 al:4
...........................................UUAGCAAGACAUUCCAUGGCAGCgGUGUGCG...................... len:31 al:1
...........................................UUuGCAAGACAUUCCAUGGCAGCUGUGU......................... len:28 al:2
...........................................UUAGCAAGACAUUCCAUGGCAGCUGcGUGCG...................... len:31 al:4
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGcGCG...................... len:31 al:6
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGc......................... len:28 al:1
...........................................UUAGCAAGACAUUCCgUGGCAGCUGUGUGCG...................... len:31 al:3
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGuG...................... len:31 al:3
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGC....................... len:30 al:17
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUG........................ len:29 al:3
...........................................UUAGCAAGACgUUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGaCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCcAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:2
...........................................UUAGCAAGcCAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:2
...........................................UUAGCAAGACAUcCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGU......................... len:28 al:5
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGu....................... len:30 al:5
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGCu...................... len:31 al:94
...........................................UUAGCAAGACAUUCCAUGuCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCU............................. len:24 al:1
...........................................UUAaCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAcUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGCc...................... len:31 al:19
...........................................UUAGCAAGACAUUCCAUuGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCUGU........................... len:26 al:5
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUaCG...................... len:31 al:1
...........................................UUAGCuAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCcGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGgCAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:3
...........................................UUAGCAAGACAUUCCAUGGCAGCaGUGUGCG...................... len:31 al:4
...........................................UUAGCAcGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:1
...........................................UUAGCAAGACAcUCCAUGGCAGCUGUGUGC....................... len:30 al:2
...........................................UUAGCAAGACAcUCCAUGGCAGCUGUGUG........................ len:29 al:1
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGgG...................... len:31 al:2
...........................................UUAGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:994
...........................................cUAGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:31 al:3
............................................UAGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:30 al:3
.............................................AGCAAGACAUUCCgUGGCAGCUGUGU......................... len:26 al:1
.............................................AGCAAGACAUUCCAUGGCAGCUGUGU......................... len:26 al:1
.............................................AGCAAGACAUUCCAUGGCAGCUGUGUGCu...................... len:29 al:1
.............................................AGCAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:29 al:20
.............................................AGCAAGACAUUCCAUGGCAGCUGUGUGCa...................... len:29 al:1
.............................................AGCAAGACAUUCCAUGGCAGCUGUGUGu....................... len:28 al:1
...............................................CAAGACAUUCCAUGGCAGCUGUGUGCG...................... len:27 al:2
...............................................CAAGACAUUCCAUGGCAGCUGc........................... len:22 al:1
................................................AAGACAUUCCAUGGCAGCUGUGUGCa...................... len:26 al:1
................................................AAGACAUUCCAUGGCAGCUGUGc......................... len:23 al:1
................................................AAGACAUUCCAUGGCAGCUGUGUGCG...................... len:26 al:1
.................................................AGACAUUCCAUGGCAGCUGUGUGCG...................... len:25 al:1
.................................................AGACAUUCCAUGGCAGCUGUGUGCa...................... len:25 al:1
.................................................AGACAUUCCAUGGCAGCUGUGUGC....................... len:24 al:2
..................................................GACAUUCCAUGGCAGCUGUGU......................... len:21 al:1
..................................................GACAUUCCAUGGCAGCUGUGUGCG...................... len:24 al:1
..................................................GACAUUCCAUGGCAGCUGUGUGCc...................... len:24 al:1
...................................................ACAUUCCAUGGCAGCUGUGUa........................ len:21 al:2
...................................................ACAgUCCAUGGCAGCUGUGUGCGC..................... len:24 al:2
...................................................ACAUUuCAUGGCAGCUGUGUGCG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCGCUu................... len:26 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGu....................... len:22 al:13
...................................................ACAUUCCAUGGCAGCUGUGUGCu...................... len:23 al:52
...................................................ACAUUCCAUGGCAGCUGUGUaCG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGC....................... len:22 al:45
...................................................ACAcUCCAUGGCAGCUGUGUGCG...................... len:23 al:1
...................................................ACAUUCuAUGGCAGCUGUGUGCG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGgG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCGuUA................... len:26 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCGu..................... len:24 al:70
...................................................ACAUUCCAUGGCAGCUGUGUGCGuU.................... len:25 al:18
...................................................ACAUUCCAUGGCAGCUGUGUu........................ len:21 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCc...................... len:23 al:7
...................................................ACAUUCCAUGGCAGCUGUGUGCa...................... len:23 al:70
...................................................ACAUUCCAUGGCAGCUuUGUGC....................... len:22 al:2
...................................................ACAUUCCAUGGCAGCcGU........................... len:18 al:1
...................................................ACAUUCCAUGGCAGCUGUa.......................... len:19 al:2
...................................................ACAUUCCAUGGCAGCUGc........................... len:18 al:1
...................................................ACAUUCCAUGGCAGCUGU........................... len:18 al:1
...................................................ACAUUCCAUGGCAGCUGUGUG........................ len:21 al:5
...................................................ACAUUCCAUGGCAGCUGUGcGC....................... len:22 al:1
...................................................ACAUUCCAUGGCAGCUGUG.......................... len:19 al:2
...................................................ACAUcCCAUGGCAGCUGUGUGCG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCGg..................... len:24 al:2
...................................................ACAUUCCAUGGCAGCUaUGUGCG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCcGUGUGCG...................... len:23 al:1
...................................................ACAUUCCAUGGCgGCUGUGUGCG...................... len:23 al:3
...................................................ACAUUCCAUGGCAGCUGUGU......................... len:20 al:3
...................................................ACAUUCCAUGGCAGCaGUGUGCG...................... len:23 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCGC..................... len:24 al:8
...................................................ACAUUCCAUGGCAGCUGUGUGa....................... len:22 al:8
...................................................ACAUUCCAUGGCAGCUGUGc......................... len:20 al:1
...................................................ACAUUCCAUGGCAGCUGUGUGCG...................... len:23 al:339
....................................................CAUUCCcUGGCAGCUGUGUGCG...................... len:22 al:1
....................................................CAUUCCAUGGCAGCUGUGUGgG...................... len:22 al:1
....................................................CAUUCCgUGGCAGCUGUGUGC....................... len:21 al:1
....................................................CAUUCCAUaGCAGCUGUGUGCG...................... len:22 al:3
....................................................CAUUCCAUGGCAGCUGUGcGCG...................... len:22 al:3
....................................................CAcUCCAUGGCAGCUGUGUG........................ len:20 al:1
....................................................CAUUCCAUGGCAGCUGUGUGg....................... len:21 al:1
....................................................CAcUCCAUGGCAGCUGUGUGCG...................... len:22 al:5
....................................................CAUUCCAUGGCAGCUGUGUGuG...................... len:22 al:3
....................................................CAUUCCAUGGCgGCUGUGUGC....................... len:21 al:1
....................................................CAUUCCgUGGCAGCUGUGUGCG...................... len:22 al:2
....................................................CAUUCCAUGGCAGCUGUGUa........................ len:20 al:1
....................................................CAUUCCAUGGCAGCUGUGUGCGu..................... len:23 al:42
....................................................CAUUCCAUGGCAGCUGUGUGCa...................... len:22 al:226
....................................................CAUUCCAUGGCAaCUGUGUGCG...................... len:22 al:1
....................................................CAUUCCAUGGCAGCUGUGUGu....................... len:21 al:20
....................................................CAUUCCAUGGCAGCUuUGUGCG...................... len:22 al:1
....................................................CAUUCCAUGGCAGCUGUGUGCc...................... len:22 al:16
....................................................CAUUCCAUGGCAGCUGUGUGCGuU.................... len:24 al:8
....................................................CAUUCCAUGGCAGCUGUGUGCGa..................... len:23 al:2
....................................................CAUUCCAUGGCAGCUGcGUGCG...................... len:22 al:3
....................................................CgUUCCAUGGCAGCUGUGUGCG...................... len:22 al:3
....................................................CAUUCuAUGGCAGCUGUGUGCG...................... len:22 al:1
....................................................CAUUCCAUGGCAGCUGUGUGCG...................... len:22 al:738
....................................................CAUUCCAUGGCAGCUGUGU......................... len:19 al:5
....................................................CAUUCCuUGGCAGCUGUGUGCG...................... len:22 al:1
....................................................CAUUCCAUGGCAGCUGUGUGC....................... len:21 al:109
....................................................CAUUCCAUGGCAGCUGUGUGCGC..................... len:23 al:3
....................................................gAUUCCAUGGCAGCUGUGUGC....................... len:21 al:1
....................................................CAcUCCAUGGCAGCUGUGU......................... len:19 al:1
....................................................CAUUCCAUGGCAGCUGUGUcC....................... len:21 al:1
....................................................CAUUCCAUGGCAGCUGUGc......................... len:19 al:1
....................................................CAUUCCAUGGCAGCUGUGUaCG...................... len:22 al:3
....................................................CAUUCCAUGGCAGCUGUGUGCu...................... len:22 al:83
....................................................CAUcCCAUGGCAGCUGUGUGCG...................... len:22 al:3
....................................................CAUUCCAUGGCAGgUGUGUGCG...................... len:22 al:1
....................................................CAUUCCAUGGCAGCUGUGUGa....................... len:21 al:6
....................................................CAUUCCAUGGCAGCUGUGUG........................ len:20 al:18
....................................................CAUUCCAUGGCAGCUGUa.......................... len:18 al:2
....................................................CAUUCCAUGGCgGCUGUGUGCG...................... len:22 al:2
....................................................CAUUCCAUGGCAGCUGUG.......................... len:18 al:6
.....................................................AUUCCAUGGCAGCUGUGUGCGuUA................... len:24 al:1
.....................................................AUUCCAUGGCAGCaGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUGUGa....................... len:20 al:11
.....................................................AUUCCAUGGCAGCUGUGaGCG...................... len:21 al:1
.....................................................AcUCCAUGGCAGCUGUGUGCG...................... len:21 al:5
.....................................................AUUCCAUGGCAGCUGUGUGg....................... len:20 al:2
.....................................................AUUCCAUGGCAGCUGUGUGuG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUGUGCGg..................... len:22 al:2
.....................................................AUUCCAUGGCAGCUGUGUaC....................... len:20 al:1
.....................................................AUUCCAUGGCAGCUGUGUa........................ len:19 al:3
.....................................................AUUCCAUGGCAGCcGUGUGCG...................... len:21 al:5
.....................................................AUUCCAUGGCcGCUGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGaGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUGa......................... len:18 al:2
.....................................................AUUCCAUGGCAGCUGUGUGC....................... len:20 al:225
.....................................................AcUCCAUGGCAGCUGUGUGC....................... len:20 al:1
.....................................................AUUCCAUGGCuGCUGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGcGUGC....................... len:20 al:2
.....................................................AUUCCAUGGCAGCUGUGUGCGuU.................... len:23 al:20
.....................................................AUUCuAUGGCAGCUGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUaUGCG...................... len:21 al:3
.....................................................AUUCCAUGGCAGCUGUGU......................... len:18 al:18
.....................................................AUUCCAUGGCAGCcGUGUGC....................... len:20 al:2
.....................................................AUUCCAUGuCAGCUGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUGUGCa...................... len:21 al:269
.....................................................AUUCCAUGGCAGCUGUGc......................... len:18 al:2
.....................................................AUUCCAUGGCAGCUGUGUGCc...................... len:21 al:19
.....................................................AUUCCAUGGCAGCUGUGUu........................ len:19 al:1
.....................................................AUUCCgUGGCAGCUGUGUGC....................... len:20 al:1
.....................................................AUUuCAUGGCAGCUGUGUGCG...................... len:21 al:2
.....................................................AUUCCAUGGCAGCUGUGUGCG...................... len:21 al:875
.....................................................AUUCCAUGGCAGCUGUGUc........................ len:19 al:8
.....................................................AUUCCAUGGCAGCUGUGUGu....................... len:20 al:60
.....................................................AUUCCAUGGCAGCUGUGcGCG...................... len:21 al:2
.....................................................AUUCCAUGGCAGCUGUG.......................... len:17 al:1
.....................................................AUcCCAUGGCAGCUGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUGUGgG...................... len:21 al:2
.....................................................AUUCCAUGGCAGCUGUGUGCu...................... len:21 al:92
.....................................................AUUCCAUGGCAGCcGUGU......................... len:18 al:1
.....................................................AUUCCAUGGCAGCUGUGUG........................ len:19 al:30
.....................................................AUUCCgUGGCAGCUGUGUGCG...................... len:21 al:2
.....................................................gUUCCAUGGCAGCUGUGUG........................ len:19 al:1
.....................................................AUUCCAUGGCgGCUGUGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGcGUGCG...................... len:21 al:1
.....................................................AUUCCAUGGCAGCUGUGUGCGu..................... len:22 al:108
.....................................................gUUCCAUGGCAGCUGUGUGC....................... len:20 al:1
.....................................................AUUCCAUGGCAGCUGUGUGCGC..................... len:22 al:9
.....................................................AUUCCAUGGCAGCUGUGUGCGa..................... len:22 al:4
.....................................................AUcCCAUGGCAGCUGUGUGC....................... len:20 al:1
.....................................................AUUCCAUGGCAGCUGUGcGC....................... len:20 al:2
.....................................................AUUCCAcGGCAGCUGUGUGCG...................... len:21 al:5
.....................................................gUUCCAUGGCAGCUGUGU......................... len:18 al:2
......................................................UUCCAUGGCAGCUGUGUGC....................... len:19 al:6
......................................................UUCCAUGGCAGCUGUGUGCa...................... len:20 al:3
......................................................UUCCAUGGCAGCUGcGUGCG...................... len:20 al:1
......................................................UUCCAUGGCAGCUGUGUGCG...................... len:20 al:27
......................................................UUCCAUGGCAGCUGUGUG........................ len:18 al:4
......................................................UUCCAUGGCAGCUGUGUGCGCc.................... len:22 al:2
......................................................UUCCAUGGCAGCcGUGUGCG...................... len:20 al:1
......................................................UUCCAUGGCAGCUGUGUGCu...................... len:20 al:1
......................................................UUCCAUGGCAGCUGUGUGCc...................... len:20 al:1
......................................................UUCCAUGGCAGCUGUGUGu....................... len:19 al:2
......................................................UUCCAUGuCAGCUGUGUGC....................... len:19 al:1
......................................................UUCCAUGGCAGCUGUGUGCGu..................... len:21 al:3
.......................................................UCCAUGGCAGCUGUGUGCG...................... len:19 al:2
.......................................................UCCAUGGCAGCUGUGUGCu...................... len:19 al:1
.......................................................UCCAUGGCAGCUGUGUGCc...................... len:19 al:1
.......................................................UCCAUGGCAGCUGUGUGCGu..................... len:20 al:2
.......................................................UCCAUGGCAGCUGUGUaCG...................... len:19 al:1
.......................................................UCCAUGGCAGCUGUGUGC....................... len:18 al:1
........................................................CCAUGGCAGCUGUGUGCG...................... len:18 al:1
..........................................................AUGGaAGCUGUGUGCGCU.................... len:18 al:1
..........................................................................CUAGGGCUUCACCUUUUUC... len:19 al:1
..........................................................................CUAGGGCUUCACCUUUUUCA.. len:20 al:1
..........................................................................CUAGGGCUUCACCUUUUUCAG. len:21 al:3
..........................................................................CUAGGGCUUCACCUUUUUCAGu len:22 al:1