FastQCFastQC Report
Sun 22 Dec 2024
68--1D9_R1_001.fastp-trim.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename68--1D9_R1_001.fastp-trim.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22625726
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length15-130
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGCTGATGCTCGCCCTCCCGTCCCAGGAGGATGGCCTGGCTGATGA278980.12330212078056632No Hit
CCCCCGAAGAGCATCACCCCAACCCCAAAGCAACGCCGTTGCCTGGCACC264080.11671669673715664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)