Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 10--1E7_R1_001 10--1E7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40266645.0 6 Gbp 0.0 150.0 20.0 74.53051843807343 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 10--1E7_R2_001 10--1E7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40266645.0 6 Gbp 0.0 150.0 20.0 73.90908034502553 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1A10_R1_001 1A10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42597485.0 6.3 Gbp 0.0 150.0 20.0 74.24390406786955 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1A10_R2_001 1A10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42597485.0 6.3 Gbp 0.0 150.0 20.0 73.32234643706961 150.0 150 pass pass fail pass fail warn pass pass pass warn warn 1A12_R1_001 1A12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43160424.0 6.4 Gbp 0.0 150.0 20.0 74.78139104456179 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1A12_R2_001 1A12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43160424.0 6.4 Gbp 0.0 150.0 20.0 73.80336377832334 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1A1_R1_001 1A1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40252453.0 6 Gbp 0.0 150.0 21.0 75.88063535024399 150.0 150 pass pass fail pass fail pass pass pass pass pass warn 1A1_R2_001 1A1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40252453.0 6 Gbp 0.0 150.0 20.0 75.23629020523379 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1A3_R1_001 1A3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 48178737.0 7.2 Gbp 0.0 150.0 22.0 72.65525048971315 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1A3_R2_001 1A3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 48178737.0 7.2 Gbp 0.0 150.0 21.0 71.63617366789325 150.0 150 pass pass fail pass fail warn pass pass pass warn warn 1A5_R1_001 1A5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43071845.0 6.4 Gbp 0.0 150.0 20.0 74.79424315591557 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1A5_R2_001 1A5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43071845.0 6.4 Gbp 0.0 150.0 20.0 74.2192876900449 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1A6_R1_001 1A6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37482924.0 5.6 Gbp 0.0 150.0 20.0 76.23359512510224 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1A6_R2_001 1A6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37482924.0 5.6 Gbp 0.0 150.0 20.0 75.0431878984575 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1A8_R1_001 1A8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 54274968.0 8.1 Gbp 0.0 150.0 25.0 69.93395207504145 150.0 150 pass pass fail pass fail warn pass pass warn warn fail 1A8_R2_001 1A8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 54274968.0 8.1 Gbp 0.0 150.0 24.0 68.85448716741045 150.0 150 pass pass fail pass fail warn pass pass warn warn fail 1B10_R1_001 1B10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 58276941.0 8.7 Gbp 0.0 150.0 23.0 72.72056508733485 150.0 150 pass pass fail pass fail warn pass pass pass pass fail 1B10_R2_001 1B10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 58276941.0 8.7 Gbp 0.0 150.0 23.0 71.90433505632218 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1B1_R1_001 1B1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41261610.0 6.1 Gbp 0.0 150.0 21.0 76.61217728472872 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1B1_R2_001 1B1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41261610.0 6.1 Gbp 0.0 150.0 20.0 75.75538615223945 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1B2_R1_001 1B2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 51981928.0 7.7 Gbp 0.0 150.0 20.0 74.61539480361597 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1B2_R2_001 1B2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 51981928.0 7.7 Gbp 0.0 150.0 20.0 73.73031670563672 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1B4_R1_001 1B4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46319805.0 6.9 Gbp 0.0 150.0 21.0 76.4759505640456 150.0 150 pass pass fail pass fail pass pass pass pass pass warn 1B4_R2_001 1B4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46319805.0 6.9 Gbp 0.0 150.0 21.0 75.52848338083719 150.0 150 pass pass fail pass fail warn pass pass pass warn warn 1B5_R1_001 1B5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41996136.0 6.2 Gbp 0.0 150.0 20.0 77.52095778203648 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1B5_R2_001 1B5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41996136.0 6.2 Gbp 0.0 150.0 20.0 76.65577326157859 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1C6_R1_001 1C6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37789684.0 5.6 Gbp 0.0 150.0 22.0 74.43753682963148 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1C6_R2_001 1C6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37789684.0 5.6 Gbp 0.0 150.0 21.0 73.27956247810955 150.0 150 pass pass fail pass fail warn pass pass pass warn warn 1C8_R1_001 1C8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45207534.0 6.7 Gbp 0.0 150.0 21.0 75.14222256366625 150.0 150 pass pass fail pass fail pass pass pass pass pass warn 1C8_R2_001 1C8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45207534.0 6.7 Gbp 0.0 150.0 20.0 74.25451661757583 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1C9_R1_001 1C9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41704979.0 6.2 Gbp 0.0 150.0 20.0 77.77860320361081 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1C9_R2_001 1C9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41704979.0 6.2 Gbp 0.0 150.0 20.0 76.99510400596081 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1D3_R1_001 1D3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40207005.0 6 Gbp 0.0 150.0 21.0 76.52252072177009 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1D3_R2_001 1D3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40207005.0 6 Gbp 0.0 150.0 20.0 75.65990930709799 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1D7_R1_001 1D7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37628233.0 5.6 Gbp 0.0 150.0 20.0 75.43531809793883 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1D7_R2_001 1D7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37628233.0 5.6 Gbp 0.0 150.0 20.0 74.45463573160544 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1D8_R1_001 1D8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41111159.0 6.1 Gbp 0.0 150.0 20.0 75.55046512626579 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1D8_R2_001 1D8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41111159.0 6.1 Gbp 0.0 150.0 20.0 74.72388635918728 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1D9_R1_001 1D9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46529616.0 6.9 Gbp 0.0 150.0 23.0 72.97703831727132 150.0 150 pass pass fail pass fail warn pass pass pass pass fail 1D9_R2_001 1D9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46529616.0 6.9 Gbp 0.0 150.0 22.0 71.98820604010888 150.0 150 pass pass fail pass fail fail pass pass pass warn fail 1F1_R1_001 1F1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 47842521.0 7.1 Gbp 0.0 150.0 22.0 78.87244371235845 150.0 150 pass pass fail pass fail warn pass pass pass pass fail 1F1_R2_001 1F1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 47842521.0 7.1 Gbp 0.0 150.0 22.0 77.87755049785162 150.0 150 pass pass fail pass fail warn pass pass pass pass fail 1F5_R1_001 1F5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46946594.0 7 Gbp 0.0 150.0 21.0 74.6192257965073 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1F5_R2_001 1F5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46946594.0 7 Gbp 0.0 150.0 20.0 73.67458059339361 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1F7_R1_001 1F7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36687080.0 5.5 Gbp 0.0 150.0 21.0 76.12461109111443 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1F7_R2_001 1F7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36687080.0 5.5 Gbp 0.0 150.0 20.0 75.0414111033076 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1F9_R1_001 1F9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38875560.0 5.8 Gbp 0.0 150.0 20.0 77.26627488126219 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1F9_R2_001 1F9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38875560.0 5.8 Gbp 0.0 150.0 20.0 76.28203942522715 150.0 150 pass pass fail pass fail warn pass pass pass warn warn 1G4_R1_001 1G4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35345229.0 5.3 Gbp 0.0 150.0 21.0 82.85779724113338 150.0 150 pass pass fail pass fail pass pass pass pass pass pass 1G4_R2_001 1G4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35345229.0 5.3 Gbp 0.0 150.0 20.0 82.3304421852541 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1G5_R1_001 1G5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43759150.0 6.5 Gbp 0.0 150.0 25.0 75.53690446463429 150.0 150 pass pass fail pass fail warn pass pass pass pass fail 1G5_R2_001 1G5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43759150.0 6.5 Gbp 0.0 150.0 24.0 74.63146570048123 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1H11_R1_001 1H11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38892514.0 5.8 Gbp 0.0 150.0 23.0 75.66092462371272 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1H11_R2_001 1H11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38892514.0 5.8 Gbp 0.0 150.0 22.0 74.67999207647249 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1H2_R1_001 1H2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45294766.0 6.7 Gbp 0.0 150.0 24.0 74.72614134043299 150.0 150 pass pass fail pass fail warn pass pass pass pass fail 1H2_R2_001 1H2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45294766.0 6.7 Gbp 0.0 150.0 23.0 73.89055681303097 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1H3_R1_001 1H3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40205304.0 6 Gbp 0.0 150.0 20.0 75.92716248298666 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1H3_R2_001 1H3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40205304.0 6 Gbp 0.0 150.0 20.0 74.93039633361967 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1H5_R1_001 1H5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41882899.0 6.2 Gbp 0.0 150.0 23.0 73.90073004739868 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1H5_R2_001 1H5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41882899.0 6.2 Gbp 0.0 150.0 23.0 73.15014510701361 150.0 150 pass pass fail pass fail warn pass pass pass warn fail 1H6_R1_001 1H6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40002421.0 6 Gbp 0.0 150.0 20.0 75.13315841682981 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 1H6_R2_001 1H6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40002421.0 6 Gbp 0.0 150.0 20.0 74.34790791456983 150.0 150 pass pass fail pass fail warn pass pass pass warn warn 1H9_R1_001 1H9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42281049.0 6.3 Gbp 0.0 150.0 21.0 74.42376876792058 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 1H9_R2_001 1H9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42281049.0 6.3 Gbp 0.0 150.0 21.0 73.53187887944128 150.0 150 pass pass fail pass fail warn pass pass pass pass warn 2A3_R1_001 2A3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34469623.0 5.1 Gbp 0.0 150.0 20.0 77.47207632782298 150.0 150 pass pass pass pass fail pass pass pass pass pass pass 2A3_R2_001 2A3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34469623.0 5.1 Gbp 0.0 150.0 20.0 77.10240593495888 150.0 150 pass pass pass pass fail warn pass pass pass warn warn 2C2_R1_001 2C2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43416389.0 6.5 Gbp 0.0 150.0 22.0 76.33050932630593 150.0 150 pass pass pass pass fail warn pass pass pass pass fail 2C2_R2_001 2C2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43416389.0 6.5 Gbp 0.0 150.0 22.0 75.85539195025972 150.0 150 pass pass pass pass fail fail pass pass pass warn fail 2D1_R1_001 2D1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38855653.0 5.8 Gbp 0.0 150.0 21.0 76.10481593022605 150.0 150 pass pass pass pass fail warn pass pass pass pass warn 2D1_R2_001 2D1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38855653.0 5.8 Gbp 0.0 150.0 21.0 75.60227430233985 150.0 150 pass pass pass pass fail warn pass pass pass pass warn 2D2_R1_001 2D2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30605474.0 4.5 Gbp 0.0 150.0 20.0 79.32430621481335 150.0 150 pass pass pass pass fail warn pass pass pass pass pass 2D2_R2_001 2D2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30605474.0 4.5 Gbp 0.0 150.0 20.0 78.93386229122362 150.0 150 pass pass pass pass fail warn pass pass pass warn warn 2G2_R1_001 2G2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 44532287.0 6.6 Gbp 0.0 150.0 20.0 78.84055705739776 150.0 150 pass pass pass pass fail warn pass pass pass pass pass 2G2_R2_001 2G2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 44532287.0 6.6 Gbp 0.0 150.0 20.0 78.42384691881718 150.0 150 pass pass pass pass fail warn pass pass pass pass warn 2H3_R1_001 2H3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32753419.0 4.9 Gbp 0.0 150.0 20.0 79.49911646216009 150.0 150 pass pass pass pass fail pass pass pass pass pass pass 2H3_R2_001 2H3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32753419.0 4.9 Gbp 0.0 150.0 20.0 79.06471843761189 150.0 150 pass pass pass pass fail warn pass pass pass warn warn 39--2E2_R1_001 39--2E2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39586592.0 5.9 Gbp 0.0 150.0 21.0 74.44262253036588 150.0 150 pass pass pass pass fail warn pass pass pass pass warn 39--2E2_R2_001 39--2E2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39586592.0 5.9 Gbp 0.0 150.0 21.0 73.83358686421985 150.0 150 pass pass pass pass fail warn pass pass pass warn warn 6--1E3_R1_001 6--1E3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 49736709.0 7.4 Gbp 0.0 150.0 20.0 73.90361494903057 150.0 150 pass pass fail pass fail warn pass pass pass pass pass 6--1E3_R2_001 6--1E3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 49736709.0 7.4 Gbp 0.0 150.0 20.0 73.08391591363394 150.0 150 pass pass fail pass fail warn pass pass pass pass warn