Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 1A10_R1_001 1A10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8619516.0 1.2 Gbp 0.0 150.0 64.0 22.111715018422196 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1A10_R2_001 1A10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8619516.0 1.2 Gbp 0.0 150.0 68.0 21.05742309865489 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1A12_R1_001 1A12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8194972.0 1.2 Gbp 0.0 150.0 66.0 24.375080180818912 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1A12_R2_001 1A12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8194972.0 1.2 Gbp 0.0 150.0 68.0 22.465637984577008 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1A1_R1_001 1A1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13405128.0 2 Gbp 0.0 150.0 70.0 20.87964344590669 150.0 150 pass warn fail pass fail warn pass pass fail fail fail 1A1_R2_001 1A1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13405128.0 2 Gbp 0.0 150.0 67.0 20.57489861687104 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1A2_R1_001 1A2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16221488.0 2.4 Gbp 0.0 150.0 69.0 20.53059947935136 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1A2_R2_001 1A2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16221488.0 2.4 Gbp 0.0 150.0 67.0 20.272494748973028 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1A8_R1_001 1A8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10539495.0 1.5 Gbp 0.0 150.0 68.0 22.144006190254846 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1A8_R2_001 1A8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10539495.0 1.5 Gbp 0.0 150.0 68.0 22.033168461056377 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1A9_R1_001 1A9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18212437.0 2.7 Gbp 0.0 150.0 67.0 22.74412243355769 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1A9_R2_001 1A9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18212437.0 2.7 Gbp 0.0 150.0 67.0 21.708253793658148 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B10_R1_001 1B10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10972576.0 1.6 Gbp 0.0 150.0 66.0 23.077691929938293 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1B10_R2_001 1B10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10972576.0 1.6 Gbp 0.0 150.0 68.0 21.198044692880764 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 1B1_R1_001 1B1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15391285.0 2.3 Gbp 0.0 150.0 65.0 20.45223098629926 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 1B1_R2_001 1B1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15391285.0 2.3 Gbp 0.0 150.0 67.0 20.134485559501645 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B2_R1_001 1B2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15441789.0 2.3 Gbp 0.0 150.0 67.0 19.054821968752584 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1B2_R2_001 1B2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15441789.0 2.3 Gbp 0.0 150.0 67.0 18.960105772017116 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B5_R1_001 1B5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16716297.0 2.5 Gbp 0.0 150.0 70.0 26.127908054219468 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1B5_R2_001 1B5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16716297.0 2.5 Gbp 0.0 150.0 67.0 24.479286487535855 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B9_R1_001 1B9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12196471.0 1.8 Gbp 0.0 150.0 70.0 19.19068186710181 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1B9_R2_001 1B9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12196471.0 1.8 Gbp 0.0 150.0 69.0 17.352858804405926 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1C10_R1_001 1C10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11581215.0 1.7 Gbp 0.0 150.0 66.0 23.757109515402362 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1C10_R2_001 1C10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11581215.0 1.7 Gbp 0.0 150.0 68.0 22.30978463685428 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1C4_R1_001 1C4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20385525.0 3 Gbp 0.0 150.0 68.0 21.262018689315802 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 1C4_R2_001 1C4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20385525.0 3 Gbp 0.0 150.0 69.0 19.78540840757018 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1D10_R1_001 1D10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10538690.0 1.5 Gbp 0.0 150.0 65.0 27.36071824891539 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1D10_R2_001 1D10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10538690.0 1.5 Gbp 0.0 150.0 67.0 25.431648072797252 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1D3_R1_001 1D3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21747242.0 3.2 Gbp 0.0 150.0 70.0 19.99475312798603 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1D3_R2_001 1D3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21747242.0 3.2 Gbp 0.0 150.0 67.0 18.327372580942637 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1D4_R1_001 1D4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19267536.0 2.8 Gbp 0.0 150.0 66.0 19.5528484517544 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1D4_R2_001 1D4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19267536.0 2.8 Gbp 0.0 150.0 67.0 18.28689519591297 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1D6_R1_001 1D6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17740927.0 2.6 Gbp 0.0 150.0 64.0 20.415287171424502 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1D6_R2_001 1D6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17740927.0 2.6 Gbp 0.0 150.0 67.0 19.404700427405075 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1D8_R1_001 1D8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10088635.0 1.5 Gbp 0.0 150.0 66.0 21.121957744458886 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1D8_R2_001 1D8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10088635.0 1.5 Gbp 0.0 150.0 67.0 20.99799866868956 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1D9_R1_001 1D9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12411917.0 1.8 Gbp 0.0 150.0 69.0 27.325734413771663 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1D9_R2_001 1D9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12411917.0 1.8 Gbp 0.0 150.0 68.0 24.7619810631779 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E1_R1_001 1E1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18473203.0 2.7 Gbp 0.0 150.0 69.0 20.23278762588293 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1E1_R2_001 1E1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18473203.0 2.7 Gbp 0.0 150.0 67.0 20.442642195824 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1E3_R1_001 1E3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 23136181.0 3.4 Gbp 0.0 150.0 69.0 19.14857605122461 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1E3_R2_001 1E3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 23136181.0 3.4 Gbp 0.0 150.0 67.0 17.948455932653786 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E5_R1_001 1E5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14531670.0 2.1 Gbp 0.0 150.0 66.0 20.773342280630995 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 1E5_R2_001 1E5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14531670.0 2.1 Gbp 0.0 150.0 68.0 19.24377326017087 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1E9_R1_001 1E9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12088004.0 1.8 Gbp 0.0 150.0 68.0 30.318503738223967 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1E9_R2_001 1E9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12088004.0 1.8 Gbp 0.0 150.0 68.0 27.733373153650675 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 1F11_R1_001 1F11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10176436.0 1.5 Gbp 0.0 150.0 68.0 21.289166999887623 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1F11_R2_001 1F11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10176436.0 1.5 Gbp 0.0 150.0 68.0 20.012077333292574 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1F4_R1_001 1F4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17139209.0 2.5 Gbp 0.0 150.0 72.0 20.343928114830796 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1F4_R2_001 1F4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17139209.0 2.5 Gbp 0.0 150.0 67.0 19.476173166381788 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1F8_R1_001 1F8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10224118.0 1.5 Gbp 0.0 150.0 67.0 19.74052274808929 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1F8_R2_001 1F8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10224118.0 1.5 Gbp 0.0 150.0 68.0 18.498072519672235 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1G5_R1_001 1G5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17744776.0 2.6 Gbp 0.0 150.0 66.0 22.554793206550244 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1G5_R2_001 1G5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17744776.0 2.6 Gbp 0.0 150.0 67.0 21.754372538666974 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1H11_R1_001 1H11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8802216.0 1.3 Gbp 0.0 150.0 69.0 25.28972587988357 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1H11_R2_001 1H11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8802216.0 1.3 Gbp 0.0 150.0 68.0 23.786444509932146 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1H12_R1_001 1H12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9741443.0 1.4 Gbp 0.0 150.0 69.0 24.149900442183863 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1H12_R2_001 1H12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9741443.0 1.4 Gbp 0.0 150.0 68.0 22.58335748758252 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1H6_R1_001 1H6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18878768.0 2.8 Gbp 0.0 150.0 70.0 18.95595342032666 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1H6_R2_001 1H6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18878768.0 2.8 Gbp 0.0 150.0 67.0 18.158429236949004 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1H7_R1_001 1H7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9834424.0 1.4 Gbp 0.0 150.0 66.0 29.065014558406183 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1H7_R2_001 1H7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9834424.0 1.4 Gbp 0.0 150.0 67.0 28.856211681996896 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1H8_R1_001 1H8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9570686.0 1.4 Gbp 0.0 150.0 68.0 25.68593828039975 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1H8_R2_001 1H8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9570686.0 1.4 Gbp 0.0 150.0 68.0 22.978922433653555 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 2B2_R1_001 2B2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19288036.0 2.8 Gbp 0.0 150.0 66.0 20.41112154093625 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2B2_R2_001 2B2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19288036.0 2.8 Gbp 0.0 150.0 68.0 20.149726724234213 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 2B3_R1_001 2B3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 26026014.0 3.9 Gbp 0.0 150.0 69.0 17.574585238538184 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2B3_R2_001 2B3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 26026014.0 3.9 Gbp 0.0 150.0 67.0 16.051961478494103 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2C1_R1_001 2C1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21593184.0 3.2 Gbp 0.0 150.0 67.0 18.899016931838215 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2C1_R2_001 2C1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21593184.0 3.2 Gbp 0.0 150.0 68.0 18.78206969372403 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 2C2_R1_001 2C2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20705100.0 3.1 Gbp 0.0 150.0 66.0 17.663074819267987 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 2C2_R2_001 2C2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20705100.0 3.1 Gbp 0.0 150.0 67.0 17.91290967490368 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2D2_R1_001 2D2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21814155.0 3.2 Gbp 0.0 150.0 67.0 17.812754703793132 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2D2_R2_001 2D2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21814155.0 3.2 Gbp 0.0 150.0 68.0 17.115778862420594 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 2E2_R1_001 2E2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21855244.0 3.2 Gbp 0.0 150.0 70.0 16.360313953389007 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 2E2_R2_001 2E2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21855244.0 3.2 Gbp 0.0 150.0 69.0 14.787257705279336 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2F1_R1_001 2F1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19547489.0 2.9 Gbp 0.0 150.0 67.0 20.74230101532513 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 2F1_R2_001 2F1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19547489.0 2.9 Gbp 0.0 150.0 69.0 20.20627956829132 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 2G1_R1_001 2G1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17345549.0 2.6 Gbp 0.0 150.0 66.0 17.04700701001501 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 2G1_R2_001 2G1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17345549.0 2.6 Gbp 0.0 150.0 67.0 16.825721026527333 150.0 150 pass pass pass pass fail warn pass pass fail fail fail