FastQCFastQC Report
Fri 4 Oct 2024
28--1D4_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename28--1D4_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24083123
Total Bases3.6 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG925940.3844767142533798No Hit
GGAAAACTAAGATGGATTAAACTGGACGGGAAGTTCGAAAGAGCGAAGAA248070.10300574389791556No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)