---
author: Sam White
toc-title: Contents
toc-depth: 5
toc-location: left
layout: post
title: Data Received - Yaamini's C.virginica WGBS and RNAseq Data from ZymoResearch
date: '2021-05-28 10:12'
tags: 
  - Crassostrea virginica
  - wgbs
  - RNAseq
categories: 
  - 2021
  - Data Received
---
Yaamini received her sequencing data from ZymoResearch; both whole genome bisfulfite sequencing (WGBS) and RNAseq. [I was tasked with downloading the data and running QC](https://github.com/RobertsLab/resources/issues/1209).

FastQ files were downloaded to Owl ([https://owl.fish.washington.edu/nightingales/C_virginica/](https://owl.fish.washington.edu/nightingales/C_virginica/)) and MD5 checksums were verified (not shown).

[See this GitHub repo for full set of metadata associated with these files](https://github.com/RobertsLab/project-oyster-comparative-omics/tree/master/metadata).

Next up, I'll run [`FastQC`](https://www.bioinformatics.babraham.ac.uk/projects/fastqc/), as well as get our [nightingales spreadsheet](https://b.link/nightingales) updated.