---
author: Sam White
toc-title: Contents
toc-depth: 5
toc-location: left
date: 2016-12-21 22:49:24+00:00
layout: post
slug: sample-submission-geoduck-tissue-gdna-for-illumina-pilot-sequencing-project
title: Sample Submission - Geoduck Tissue & gDNA for Illumina Pilot Sequencing Project
categories:
  - 2016
  - Geoduck Genome Sequencing
  - Samples Submitted
tags:
  - geoduck
  - Illumina
  - Panopea generosa
---

Sent the following samples to Illumina for possible selection in a new pilot sequencing platform they're working on.

The 12 samples will be used for RNAseq for genome annotation - numbers indicate desired sequencing priority.

Juvenile and larval samples were from Hollie Putnam (see links below for more info).

Other tissue was from a single, adult geoduck, collected by [Brent & Steven on 20150811](https://onsnetwork.org/halfshell/2015/08/11/big-day-big-clam/).





  1. Gonad


  2. Heart


  3. Ctenidia


  4. Juvenile OA exposure (super low)  ([EPI_115, EPI_116](https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Setup_Notes/Sample_List.csv))


  5. Juvenile ambient exposure (ambient treatment) ([EPI_123, EPI_124](https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Setup_Notes/Sample_List.csv))


  6. Larvae day 0 ([EPI_74, EPI_75](https://github.com/hputnam/project_larval_geoduck_OA/edit/master/Larval_Sample_Info.csv))


  7. Larvae day 5 ([EPI_99](https://github.com/hputnam/project_larval_geoduck_OA/blob/master/Larval_Sample_Info.csv))


  8. Crystalline style


  9. Byssus gland


  10. Mantle


  11. Labial palps


  12. Juvenile OA exposure - low treatment ([EPI_107, EPI_108](https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Setup_Notes/Sample_List.csv))





In addition to the above 12 samples, ~1.5μg of geoduck gDNA ([isolated this morning](dna-isolation-geoduck-gdna-for-potential-illumina-initiated-sequencing-project.html)) was sent.