---
author: Sam White
toc-title: Contents
toc-depth: 5
toc-location: left
date: 2015-11-05 01:45:57+00:00
layout: post
slug: dna-quantification-quality-assessment-geoduck-oly-gdna
title: DNA Quantification & Quality Assessment - Geoduck & Oly gDNA
categories:
  - 2015
  - Geoduck Genome Sequencing
  - Olympia Oyster Genome Sequencing
tags:
  - bioanalyzer
  - DNA Quantification
  - gDNA
  - geoduck
  - NanoDrop1000
  - olympia oyster
  - Ostrea lurida
  - Panopea generosa
---

Quantified the following samples with the Roberts Lab NanoDrop1000 (ThermoFisher) and assessed DNA integrity on the Seeb Lab Bioanalyzer 2100 (Agilent) using the DNA 12000 chip assay:




    
  * [geoduck gDNA for genome sequencing](https://robertslab.github.io/sams-notebook/posts/2015/2015-10-30-dna-isolation-geoduck-olympia-oyster-2/)

    
  * [Olympia oyster gDNA for genome sequencing](https://robertslab.github.io/sams-notebook/posts/2015/2015-10-30-dna-isolation-geoduck-olympia-oyster-2/)



Results:

Bioanalyzer Data File (XAD file): [2100 expert_DNA 12000_DE72902486_2015-11-04_15-06-32.xad](https://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/2100%20expert_DNA%2012000_DE72902486_2015-11-04_15-06-32.xad)

![](https://eagle.fish.washington.edu/Arabidopsis/20151104_gDNA_geo_oly_ODs.JPG)(http://eagle.fish.washington.edu/Arabidopsis/20151104_gDNA_geo_oly_ODs.JPG)

![](https://eagle.fish.washington.edu/Arabidopsis/20151104_gDNA_geo_oly_plots.JPG)(http://eagle.fish.washington.edu/Arabidopsis/20151104_gDNA_geo_oly_plots.JPG)

![](https://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/20151104_bioanalyzer_geoduck_electropherogram.jpg)(http://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/20151104_bioanalyzer_geoduck_electropherogram.jpg)

![](https://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/20151104_bioanalyzer_oly_electropherogram.jpg)(http://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/20151104_bioanalyzer_oly_electropherogram.jpg)

![](https://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/20151104_bioanalyzer_geoduck_oly_gels.jpg)(http://eagle.fish.washington.edu/Arabidopsis/Bioanalyzer%20Data/20151104_bioanalyzer_geoduck_oly_gels.jpg)



OK, there's a LOT going on here. Will update this notebook with my thoughts sometime tomorrow...


