---
author: Sam White
toc-title: Contents
toc-depth: 5
toc-location: left
date: 2015-06-30 19:08:45+00:00
layout: post
slug: rnaseq-data-receipt-geoduck-gonad-rna-100bp-pe-illumina
title: RNAseq Data Receipt - Geoduck Gonad RNA 100bp PE Illumina
categories:
  - 2015
  - Protein expression profiles during sexual maturation in Geoduck
tags:
  - geoduck
  - Geo_pool_F
  - Geo_pool_M
  - gonad
  - Illumina
  - Panopea generosa
  - RNA-seq
---

Received notification that the [samples sent on 20150601 for RNAseq](https://robertslab.github.io/sams-notebook/posts/2015/2015-06-01-sample-submission-geoduck-gonad-for-rna-seq/) were completed.

Downloaded the following files from the GENEWIZ servers using FileZilla FTP and stored them on our server ([owl/web/nightingales/P_generosa](https://owl.fish.washington.edu/nightingales/P_generosa/)):

Geo_Pool_F_GGCTAC_L006_R1_001.fastq.gz
Geo_Pool_F_GGCTAC_L006_R2_001.fastq.gz
Geo_Pool_M_CTTGTA_L006_R1_001.fastq.gz
Geo_Pool_M_CTTGTA_L006_R2_001.fastq.gz

Generated md5 checksums for each file:


    
    <code>$for i in *; do md5 $i >> checksums.md5; done</code>



Made a readme.md file for the directory.