zr3644_8_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 23843614 lines in total
Total number of methylation call strings processed: 47687228

Final Cytosine Methylation Report
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Total number of C's analysed:	574665967

Total methylated C's in CpG context:	7618717
Total methylated C's in CHG context:	502680
Total methylated C's in CHH context:	2235182

Total C to T conversions in CpG context:	64942903
Total C to T conversions in CHG context:	98370545
Total C to T conversions in CHH context:	400995940

C methylated in CpG context:	10.5%
C methylated in non-CpG context:	0.5%