zr3644_4_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 27661678 lines in total
Total number of methylation call strings processed: 55323356

Final Cytosine Methylation Report
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Total number of C's analysed:	669985202

Total methylated C's in CpG context:	8363101
Total methylated C's in CHG context:	542684
Total methylated C's in CHH context:	2352545

Total C to T conversions in CpG context:	75439383
Total C to T conversions in CHG context:	113152728
Total C to T conversions in CHH context:	470134761

C methylated in CpG context:	10.0%
C methylated in non-CpG context:	0.5%