zr3644_3_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 21996270 lines in total
Total number of methylation call strings processed: 43992540

Final Cytosine Methylation Report
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Total number of C's analysed:	535699152

Total methylated C's in CpG context:	6898662
Total methylated C's in CHG context:	443948
Total methylated C's in CHH context:	1973057

Total C to T conversions in CpG context:	60382478
Total C to T conversions in CHG context:	91179691
Total C to T conversions in CHH context:	374821316

C methylated in CpG context:	10.3%
C methylated in non-CpG context:	0.5%