zr3644_2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 30356887 lines in total
Total number of methylation call strings processed: 60713774

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	759584550

Total methylated C's in CpG context:	9612588
Total methylated C's in CHG context:	629043
Total methylated C's in CHH context:	2793784

Total C to T conversions in CpG context:	85233478
Total C to T conversions in CHG context:	128612047
Total C to T conversions in CHH context:	532703610

C methylated in CpG context:	10.1%
C methylated in non-CpG context:	0.5%