zr3644_20_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 29703518 lines in total
Total number of methylation call strings processed: 59407036

Final Cytosine Methylation Report
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Total number of C's analysed:	732699670

Total methylated C's in CpG context:	9446280
Total methylated C's in CHG context:	639646
Total methylated C's in CHH context:	2791877

Total C to T conversions in CpG context:	82627714
Total C to T conversions in CHG context:	124919784
Total C to T conversions in CHH context:	512274369

C methylated in CpG context:	10.3%
C methylated in non-CpG context:	0.5%