zr3644_19_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 27679213 lines in total
Total number of methylation call strings processed: 55358426

Final Cytosine Methylation Report
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Total number of C's analysed:	672829740

Total methylated C's in CpG context:	8606573
Total methylated C's in CHG context:	569702
Total methylated C's in CHH context:	2546112

Total C to T conversions in CpG context:	75922883
Total C to T conversions in CHG context:	114978638
Total C to T conversions in CHH context:	470205832

C methylated in CpG context:	10.2%
C methylated in non-CpG context:	0.5%