zr3644_18_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 28983558 lines in total
Total number of methylation call strings processed: 57967116

Final Cytosine Methylation Report
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Total number of C's analysed:	700142750

Total methylated C's in CpG context:	9309881
Total methylated C's in CHG context:	603970
Total methylated C's in CHH context:	2651526

Total C to T conversions in CpG context:	78872134
Total C to T conversions in CHG context:	120545742
Total C to T conversions in CHH context:	488159497

C methylated in CpG context:	10.6%
C methylated in non-CpG context:	0.5%