zr3644_14_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 20738216 lines in total
Total number of methylation call strings processed: 41476432

Final Cytosine Methylation Report
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Total number of C's analysed:	501935153

Total methylated C's in CpG context:	7357520
Total methylated C's in CHG context:	444669
Total methylated C's in CHH context:	1936567

Total C to T conversions in CpG context:	55684720
Total C to T conversions in CHG context:	85521225
Total C to T conversions in CHH context:	350990452

C methylated in CpG context:	11.7%
C methylated in non-CpG context:	0.5%