80M_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 50011661 lines in total
Total number of methylation call strings processed: 100023322

Final Cytosine Methylation Report
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Total number of C's analysed:	1406376392

Total methylated C's in CpG context:	19782804
Total methylated C's in CHG context:	2546158
Total methylated C's in CHH context:	11779786

Total C to T conversions in CpG context:	147094206
Total C to T conversions in CHG context:	224325317
Total C to T conversions in CHH context:	1000848121

C methylated in CpG context:	11.9%
C methylated in non-CpG context:	1.2%