269M_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 53111879 lines in total
Total number of methylation call strings processed: 106223758

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	1464837941

Total methylated C's in CpG context:	19019706
Total methylated C's in CHG context:	2686754
Total methylated C's in CHH context:	12671662

Total C to T conversions in CpG context:	149514600
Total C to T conversions in CHG context:	230900162
Total C to T conversions in CHH context:	1050045057

C methylated in CpG context:	11.3%
C methylated in non-CpG context:	1.2%