106M_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 45147624 lines in total
Total number of methylation call strings processed: 90295248

Final Cytosine Methylation Report
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Total number of C's analysed:	1292966614

Total methylated C's in CpG context:	17735044
Total methylated C's in CHG context:	2204365
Total methylated C's in CHH context:	10324658

Total C to T conversions in CpG context:	130503756
Total C to T conversions in CHG context:	204433963
Total C to T conversions in CHH context:	927764828

C methylated in CpG context:	12.0%
C methylated in non-CpG context:	1.1%