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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.14

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2024-04-29, 22:55 PDT based on data in:

        General Statistics

        Showing 79/79 rows and 3/3 columns.
        Sample NameFrag Length% AlignedM Aligned
        100_R1_001
        230.6bp
        79.3%
        14.2
        107_R1_001
        237.0bp
        79.2%
        13.5
        108_R1_001
        202.9bp
        68.7%
        15.6
        109_R1_001
        234.7bp
        78.2%
        17.4
        10_R1_001
        216.7bp
        73.1%
        14.5
        110_R1_001
        239.7bp
        81.5%
        17.4
        117_R1_001
        218.0bp
        77.0%
        17.3
        118_R1_001
        238.9bp
        80.8%
        17.1
        119_R1_001
        241.1bp
        83.8%
        18.8
        11_R1_001
        231.8bp
        78.7%
        17.0
        120_R1_001
        232.7bp
        78.4%
        16.3
        121_R1_001
        236.1bp
        72.4%
        15.5
        127_R1_001
        233.8bp
        77.2%
        18.2
        128_R1_001
        267.9bp
        74.3%
        7.5
        129_R1_001
        222.6bp
        37.5%
        3.6
        12_R1_001
        216.3bp
        75.3%
        15.6
        131_R1_001
        247.9bp
        71.6%
        6.5
        137_R1_001
        261.7bp
        75.9%
        6.3
        138_R1_001
        270.7bp
        77.9%
        6.6
        139_R1_001
        258.8bp
        78.1%
        7.6
        13_R1_001
        229.7bp
        70.7%
        13.1
        140_R1_001
        272.2bp
        75.9%
        7.2
        147_R1_001
        241.0bp
        74.7%
        6.6
        148_R1_001
        190.6bp
        71.4%
        17.7
        149_R1_001
        203.7bp
        58.3%
        56.5
        150_R1_001
        190.8bp
        69.2%
        19.1
        18_R1_001
        228.8bp
        72.7%
        12.9
        19-G_R1_001
        226.8bp
        70.7%
        16.2
        19-S_R1_001
        232.0bp
        74.3%
        18.4
        19_R1_001
        235.2bp
        77.0%
        13.7
        1_R1_001
        228.9bp
        77.0%
        16.4
        20-G_R1_001
        234.6bp
        70.7%
        17.2
        20-S_R1_001
        238.7bp
        73.8%
        12.2
        20_R1_001
        225.4bp
        71.4%
        12.3
        21_R1_001
        233.5bp
        73.5%
        12.8
        28_R1_001
        231.5bp
        76.3%
        14.5
        29_R1_001
        229.6bp
        69.2%
        13.1
        2_R1_001
        235.1bp
        81.2%
        15.9
        30_R1_001
        235.3bp
        75.0%
        14.9
        31_R1_001
        265.4bp
        80.0%
        15.2
        37_R1_001
        205.8bp
        78.1%
        12.8
        38_R1_001
        197.1bp
        72.3%
        13.3
        39_R1_001
        209.7bp
        75.7%
        13.7
        3_R1_001
        214.4bp
        72.7%
        15.1
        40_R1_001
        194.7bp
        70.3%
        11.8
        41_R1_001
        196.5bp
        63.9%
        10.4
        47_R1_001
        211.9bp
        76.1%
        14.1
        48_R1_001
        208.6bp
        75.9%
        15.4
        49_R1_001
        215.0bp
        72.8%
        14.7
        4_R1_001
        270.7bp
        75.3%
        15.7
        50_R1_001
        232.3bp
        74.5%
        14.1
        57-G_R1_001
        227.7bp
        75.3%
        21.8
        57-S_R1_001
        170.1bp
        39.5%
        5.2
        57_R1_001
        214.7bp
        78.4%
        15.6
        58-G_R1_001
        229.4bp
        74.6%
        21.9
        58-S_R1_001
        183.8bp
        68.5%
        10.8
        58_R1_001
        210.4bp
        65.8%
        13.0
        59_R1_001
        273.6bp
        79.0%
        14.8
        5_R1_001
        225.8bp
        75.5%
        15.0
        60_R1_001
        221.4bp
        73.1%
        15.0
        67_R1_001
        237.4bp
        75.2%
        15.5
        68_R1_001
        220.7bp
        72.7%
        14.9
        69_R1_001
        217.0bp
        74.4%
        13.1
        70_R1_001
        206.6bp
        73.7%
        11.3
        78_R1_001
        194.7bp
        76.1%
        13.9
        79_R1_001
        226.1bp
        79.1%
        15.0
        80_R1_001
        211.9bp
        74.2%
        10.9
        83_R1_001
        218.1bp
        79.2%
        13.1
        88_R1_001
        199.4bp
        63.3%
        12.8
        90_R1_001
        204.9bp
        71.0%
        13.0
        91_R1_001
        228.5bp
        75.4%
        15.3
        97_R1_001
        198.0bp
        78.0%
        14.2
        98_R1_001
        213.4bp
        69.6%
        15.5
        99_R1_001
        217.9bp
        71.9%
        12.1
        RESUB-116_R1_001
        236.2bp
        77.5%
        12.4
        RESUB-156_R1_001
        233.9bp
        79.3%
        13.2
        RESUB-36_R1_001
        233.3bp
        82.2%
        12.4
        RESUB-76_R1_001
        206.2bp
        75.5%
        11.2
        RESUB-94_R1_001
        235.4bp
        78.3%
        13.3

        Kallisto

        Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.DOI: 10.1038/nbt.3519.

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        MultiQC v1.14 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.