[2024-06-03 09:12:40,466] multiqc [DEBUG ] This is MultiQC v1.12 [2024-06-03 09:12:40,466] multiqc [DEBUG ] No MultiQC config found: /opt/anaconda/anaconda3/lib/python3.9/site-packages/multiqc_config.yaml [2024-06-03 09:12:40,467] multiqc [DEBUG ] No MultiQC config found: /home/sr320/.multiqc_config.yaml [2024-06-03 09:12:40,467] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-06-03 09:12:40,467] multiqc [DEBUG ] Command used: /opt/anaconda/anaconda3/bin/multiqc ../analyses/13-hisat-deseq2/ -o ../analyses/13-hisat-deseq2/ [2024-06-03 09:12:41,546] multiqc [WARNING] MultiQC Version v1.22.2 now available! [2024-06-03 09:12:41,546] multiqc [DEBUG ] Command : /opt/anaconda/anaconda3/bin/multiqc ../analyses/13-hisat-deseq2/ -o ../analyses/13-hisat-deseq2/ [2024-06-03 09:12:41,546] multiqc [DEBUG ] Working dir : /home/shared/8TB_HDD_03/sr320/github/paper-pycno-sswd-2021-2022/code [2024-06-03 09:12:41,546] multiqc [DEBUG ] Template : default [2024-06-03 09:12:41,546] multiqc [DEBUG ] Running Python 3.9.7 (default, Sep 16 2021, 13:09:58) [GCC 7.5.0] [2024-06-03 09:12:41,547] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, pbmarkdup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, odgi, pangolin, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pychopper, pycoqc, minionqc, multivcfanalyzer, clusterflow, checkqc, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype, whatshap [2024-06-03 09:12:41,548] multiqc [DEBUG ] Using temporary directory for creating report: /tmp/tmp1jg1v2u4 [2024-06-03 09:12:41,974] multiqc [INFO ] Search path : /home/shared/8TB_HDD_03/sr320/github/paper-pycno-sswd-2021-2022/analyses/13-hisat-deseq2 [2024-06-03 09:12:41,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-71_03.sorted.bam.bai [2024-06-03 09:12:41,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-58_03.gtf [2024-06-03 09:12:41,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-36_03.sorted.bam [2024-06-03 09:12:41,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-57_03.sorted.bam [2024-06-03 09:12:41,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-19_03.sorted.bam.bai [2024-06-03 09:12:41,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-71_unmapped_reads.1.fastq [2024-06-03 09:12:41,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-56_03.sorted.bam.bai [2024-06-03 09:12:42,019] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-63_03.gtf [2024-06-03 09:12:42,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-69_03.bam [2024-06-03 09:12:42,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-61_03.sorted.bam.bai [2024-06-03 09:12:42,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-42_03.gtf [2024-06-03 09:12:42,043] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: GCA_032158295.index.3.ht2 [2024-06-03 09:12:42,043] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GCA_032158295.index.3.ht2 [2024-06-03 09:12:42,044] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: GCA_032158295.index.3.ht2 [2024-06-03 09:12:42,045] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GCA_032158295.index.3.ht2 [2024-06-03 09:12:42,047] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: GCA_032158295.index.3.ht2 [2024-06-03 09:12:42,047] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-83_03.sorted.bam.bai [2024-06-03 09:12:42,053] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-37_03.bam [2024-06-03 09:12:42,053] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-67_03.bam [2024-06-03 09:12:42,057] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-83_unmapped_reads.2.fastq [2024-06-03 09:12:42,057] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-39_unmapped_reads.2.fastq [2024-06-03 09:12:42,060] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-71_unmapped_reads.2.fastq [2024-06-03 09:12:42,060] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-38_03.bam [2024-06-03 09:12:42,060] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-43_03.gtf [2024-06-03 09:12:42,061] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-34_03.sorted.bam.bai [2024-06-03 09:12:42,061] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-35_03.sorted.bam.bai [2024-06-03 09:12:42,061] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-59_unmapped_reads.1.fastq [2024-06-03 09:12:42,061] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-57_03.bam [2024-06-03 09:12:42,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-40_03.sorted.bam.bai [2024-06-03 09:12:42,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-78_unmapped_reads.2.fastq [2024-06-03 09:12:42,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-34_03.gtf [2024-06-03 09:12:42,070] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-61_unmapped_reads.2.fastq [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-24_03.gtf [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-78_03.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-34_03.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-56_03.sorted.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-81_03.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-40_unmapped_reads.2.fastq [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-19_03.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-24_03.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-69_03.gtf [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-35_03.sorted.bam [2024-06-03 09:12:42,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-39_03.gtf [2024-06-03 09:12:42,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-36_03.sorted.bam.bai [2024-06-03 09:12:42,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-49_03.sorted.bam.bai [2024-06-03 09:12:42,079] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,079] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,079] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,080] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,088] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,422] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: t_data.ctab [2024-06-03 09:12:42,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-40_03.sorted.bam [2024-06-03 09:12:42,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-54_unmapped_reads.1.fastq [2024-06-03 09:12:42,447] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-38_03.sorted.bam [2024-06-03 09:12:42,450] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-37_03.sorted.bam.bai [2024-06-03 09:12:42,450] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-59_03.bam [2024-06-03 09:12:42,452] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,452] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,452] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,453] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:42,485] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:43,978] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: m_spice_sites.tab [2024-06-03 09:12:44,084] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-37_03.gtf [2024-06-03 09:12:44,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-57_unmapped_reads.1.fastq [2024-06-03 09:12:44,090] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-52_03.sorted.bam [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-76_03.sorted.bam [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-61_unmapped_reads.1.fastq [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-61_03.gtf [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-58_03.bam [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-43_03.bam [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-78_03.sorted.bam.bai [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-42_03.sorted.bam.bai [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-67_03.sorted.bam [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-75_unmapped_reads.2.fastq [2024-06-03 09:12:44,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-42_unmapped_reads.2.fastq [2024-06-03 09:12:44,103] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,104] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,104] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,105] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,106] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: GCA_032158295.index.8.ht2 [2024-06-03 09:12:44,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-23_03.bam [2024-06-03 09:12:44,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-73_03.sorted.bam.bai [2024-06-03 09:12:44,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-54_03.gtf [2024-06-03 09:12:44,110] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-63_unmapped_reads.2.fastq [2024-06-03 09:12:44,110] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-71_03.bam [2024-06-03 09:12:44,110] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-69_03.sorted.bam [2024-06-03 09:12:44,110] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-57_03.sorted.bam.bai [2024-06-03 09:12:44,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-58_unmapped_reads.2.fastq [2024-06-03 09:12:44,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-63_unmapped_reads.1.fastq [2024-06-03 09:12:44,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-76_unmapped_reads.1.fastq [2024-06-03 09:12:44,116] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-36_unmapped_reads.2.fastq [2024-06-03 09:12:44,118] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: hisat2-build_stats.txt [2024-06-03 09:12:44,118] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: hisat2-build_stats.txt [2024-06-03 09:12:44,118] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: hisat2-build_stats.txt [2024-06-03 09:12:44,119] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: hisat2-build_stats.txt [2024-06-03 09:12:44,127] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: hisat2-build_stats.txt [2024-06-03 09:12:44,134] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-52_unmapped_reads.1.fastq [2024-06-03 09:12:44,134] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-57_unmapped_reads.2.fastq [2024-06-03 09:12:44,134] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-75_03.gtf [2024-06-03 09:12:44,134] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-63_03.sorted.bam [2024-06-03 09:12:44,135] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,136] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,136] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,137] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,138] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: GCA_032158295.index.7.ht2 [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-75_03.sorted.bam [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-67_03.sorted.bam.bai [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-56_03.bam [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-19_03.gtf [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-23_03.sorted.bam.bai [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-42_03.bam [2024-06-03 09:12:44,138] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-52_unmapped_reads.2.fastq [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-54_03.bam [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-52_03.gtf [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-58_03.sorted.bam.bai [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-48_unmapped_reads.1.fastq [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-71_03.sorted.bam [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-38_03.gtf [2024-06-03 09:12:44,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-38_unmapped_reads.2.fastq [2024-06-03 09:12:44,152] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-59_03.sorted.bam.bai [2024-06-03 09:12:44,153] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,153] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,153] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,154] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:44,191] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:45,941] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: m_exon.tab [2024-06-03 09:12:46,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-76_03.gtf [2024-06-03 09:12:46,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-42_unmapped_reads.1.fastq [2024-06-03 09:12:46,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-23_unmapped_reads.1.fastq [2024-06-03 09:12:46,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-71_03.gtf [2024-06-03 09:12:46,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-73_03.gtf [2024-06-03 09:12:46,047] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-24_03.sorted.bam.bai [2024-06-03 09:12:46,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-61_03.sorted.bam [2024-06-03 09:12:46,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-58_unmapped_reads.1.fastq [2024-06-03 09:12:46,066] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-69_unmapped_reads.2.fastq [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-75_unmapped_reads.1.fastq [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-35_03.bam [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-40_03.gtf [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-83_03.sorted.bam [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-49_unmapped_reads.1.fastq [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-64_03.sorted.bam [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-69_03.sorted.bam.bai [2024-06-03 09:12:46,067] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-24_unmapped_reads.1.fastq [2024-06-03 09:12:46,071] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-78_unmapped_reads.1.fastq [2024-06-03 09:12:46,071] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-73_03.bam [2024-06-03 09:12:46,071] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-40_unmapped_reads.1.fastq [2024-06-03 09:12:46,074] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-67_03.gtf [2024-06-03 09:12:46,074] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-61_03.bam [2024-06-03 09:12:46,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-59_03.gtf [2024-06-03 09:12:46,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-37_03.sorted.bam [2024-06-03 09:12:46,079] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-67_unmapped_reads.1.fastq [2024-06-03 09:12:46,079] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-76_03.sorted.bam.bai [2024-06-03 09:12:46,079] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-34_03.sorted.bam [2024-06-03 09:12:46,085] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-48_03.bam [2024-06-03 09:12:46,085] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-52_03.sorted.bam.bai [2024-06-03 09:12:46,085] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-35_03.gtf [2024-06-03 09:12:46,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-59_unmapped_reads.2.fastq [2024-06-03 09:12:46,092] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-34_unmapped_reads.1.fastq [2024-06-03 09:12:46,092] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-23_03.gtf [2024-06-03 09:12:46,092] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-43_03.sorted.bam [2024-06-03 09:12:46,093] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-49_03.sorted.bam [2024-06-03 09:12:46,093] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-42_03.sorted.bam [2024-06-03 09:12:46,093] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-37_unmapped_reads.1.fastq [2024-06-03 09:12:46,093] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-49_03.gtf [2024-06-03 09:12:46,093] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-76_unmapped_reads.2.fastq [2024-06-03 09:12:46,093] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-75_03.bam [2024-06-03 09:12:46,096] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-48_03.sorted.bam [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-56_03.gtf [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-56_unmapped_reads.2.fastq [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-38_03.sorted.bam.bai [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-73_unmapped_reads.2.fastq [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-35_unmapped_reads.1.fastq [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-49_unmapped_reads.2.fastq [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-64_unmapped_reads.1.fastq [2024-06-03 09:12:46,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-81_03.gtf [2024-06-03 09:12:46,104] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-49_03.bam [2024-06-03 09:12:46,104] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-39_03.sorted.bam [2024-06-03 09:12:46,104] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-43_unmapped_reads.2.fastq [2024-06-03 09:12:46,104] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-64_unmapped_reads.2.fastq [2024-06-03 09:12:46,104] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-75_03.sorted.bam.bai [2024-06-03 09:12:46,111] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-64_03.bam [2024-06-03 09:12:46,117] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-37_unmapped_reads.2.fastq [2024-06-03 09:12:46,117] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-54_03.sorted.bam [2024-06-03 09:12:46,117] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-19_03.sorted.bam [2024-06-03 09:12:46,117] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-64_03.gtf [2024-06-03 09:12:46,121] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-39_unmapped_reads.1.fastq [2024-06-03 09:12:46,121] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-52_03.bam [2024-06-03 09:12:46,125] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-36_unmapped_reads.1.fastq [2024-06-03 09:12:46,125] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-73_03.sorted.bam [2024-06-03 09:12:46,128] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-48_03.sorted.bam.bai [2024-06-03 09:12:46,132] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-19_unmapped_reads.1.fastq [2024-06-03 09:12:46,133] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,134] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,134] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,135] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:46,172] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:48,059] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: e2t.ctab [2024-06-03 09:12:48,174] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-36_03.bam [2024-06-03 09:12:48,174] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-73_unmapped_reads.1.fastq [2024-06-03 09:12:48,174] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-40_03.bam [2024-06-03 09:12:48,174] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-67_unmapped_reads.2.fastq [2024-06-03 09:12:48,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-78_03.gtf [2024-06-03 09:12:48,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-76_03.bam [2024-06-03 09:12:48,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-83_unmapped_reads.1.fastq [2024-06-03 09:12:48,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-24_03.sorted.bam [2024-06-03 09:12:48,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-39_03.bam [2024-06-03 09:12:48,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-48_unmapped_reads.2.fastq [2024-06-03 09:12:48,183] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,183] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,183] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,184] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:48,217] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:49,828] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: i2t.ctab [2024-06-03 09:12:49,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-23_unmapped_reads.2.fastq [2024-06-03 09:12:49,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-81_03.sorted.bam [2024-06-03 09:12:49,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-54_unmapped_reads.2.fastq [2024-06-03 09:12:49,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-48_03.gtf [2024-06-03 09:12:49,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-35_unmapped_reads.2.fastq [2024-06-03 09:12:49,927] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-83_03.gtf [2024-06-03 09:12:49,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-81_03.sorted.bam.bai [2024-06-03 09:12:49,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-56_unmapped_reads.1.fastq [2024-06-03 09:12:49,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-43_unmapped_reads.1.fastq [2024-06-03 09:12:49,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-58_03.sorted.bam [2024-06-03 09:12:49,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-24_unmapped_reads.2.fastq [2024-06-03 09:12:49,936] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,936] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,936] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:49,937] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:51,608] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: i_data.ctab [2024-06-03 09:12:51,707] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-64_03.sorted.bam.bai [2024-06-03 09:12:51,707] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-69_unmapped_reads.1.fastq [2024-06-03 09:12:51,707] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-57_03.gtf [2024-06-03 09:12:51,707] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-63_03.sorted.bam.bai [2024-06-03 09:12:51,711] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-34_unmapped_reads.2.fastq [2024-06-03 09:12:51,711] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-81_unmapped_reads.2.fastq [2024-06-03 09:12:51,711] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-23_03.sorted.bam [2024-06-03 09:12:51,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-78_03.sorted.bam [2024-06-03 09:12:51,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-43_03.sorted.bam.bai [2024-06-03 09:12:51,721] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-38_unmapped_reads.1.fastq [2024-06-03 09:12:51,721] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-36_03.gtf [2024-06-03 09:12:51,721] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-63_03.bam [2024-06-03 09:12:51,724] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-83_03.bam [2024-06-03 09:12:51,724] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-59_03.sorted.bam [2024-06-03 09:12:51,725] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-19_unmapped_reads.2.fastq [2024-06-03 09:12:51,728] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-81_unmapped_reads.1.fastq [2024-06-03 09:12:51,742] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-39_03.sorted.bam.bai [2024-06-03 09:12:51,742] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: PSC-54_03.sorted.bam.bai [2024-06-03 09:12:53,447] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.4.3 [2024-06-03 09:12:53,521] multiqc.modules.bowtie2.bowtie2 [INFO ] Found 32 reports [2024-06-03 09:12:53,533] multiqc [INFO ] Compressing plot data [2024-06-03 09:12:53,538] multiqc [INFO ] Report : ../analyses/13-hisat-deseq2/multiqc_report.html [2024-06-03 09:12:53,539] multiqc [INFO ] Data : ../analyses/13-hisat-deseq2/multiqc_data [2024-06-03 09:12:53,539] multiqc [DEBUG ] Moving data file from '/tmp/tmp1jg1v2u4/multiqc_data' to '../analyses/13-hisat-deseq2/multiqc_data' [2024-06-03 09:12:53,720] multiqc [INFO ] MultiQC complete