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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.12

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2024-05-29, 08:15 based on data in: /home/shared/8TB_HDD_03/sr320/github/paper-pycno-sswd-2021-2022/analyses/11-kallisto/kallisto_02

        General Statistics

        Showing 32/32 rows and 3/3 columns.
        Sample NameFrag Length% AlignedM Aligned
        PSC-19_R1_001
        290.3bp
        38.0%
        8.9
        PSC-23_R1_001
        299.3bp
        36.8%
        8.7
        PSC-24_R1_001
        299.1bp
        34.8%
        7.9
        PSC-34_R1_001
        304.5bp
        30.7%
        8.7
        PSC-35_R1_001
        308.9bp
        31.1%
        8.2
        PSC-36_R1_001
        286.3bp
        26.8%
        5.7
        PSC-37_R1_001
        298.1bp
        32.2%
        5.5
        PSC-38_R1_001
        299.3bp
        33.9%
        9.6
        PSC-39_R1_001
        284.4bp
        21.0%
        4.7
        PSC-40_R1_001
        305.5bp
        32.3%
        6.8
        PSC-42_R1_001
        310.1bp
        37.7%
        7.9
        PSC-43_R1_001
        309.1bp
        38.4%
        8.5
        PSC-48_R1_001
        292.1bp
        37.9%
        7.3
        PSC-49_R1_001
        300.7bp
        38.3%
        8.4
        PSC-52_R1_001
        295.9bp
        38.0%
        8.4
        PSC-54_R1_001
        279.3bp
        38.5%
        9.7
        PSC-56_R1_001
        306.7bp
        32.1%
        6.7
        PSC-57_R1_001
        318.9bp
        38.5%
        8.6
        PSC-58_R1_001
        309.7bp
        38.2%
        8.6
        PSC-59_R1_001
        308.6bp
        37.2%
        8.4
        PSC-61_R1_001
        312.1bp
        38.0%
        7.6
        PSC-63_R1_001
        327.9bp
        38.3%
        8.2
        PSC-64_R1_001
        305.4bp
        38.4%
        9.2
        PSC-67_R1_001
        292.3bp
        34.2%
        8.4
        PSC-69_R1_001
        319.8bp
        36.2%
        8.2
        PSC-71_R1_001
        310.4bp
        32.8%
        8.7
        PSC-73_R1_001
        312.5bp
        38.2%
        9.6
        PSC-75_R1_001
        302.7bp
        23.0%
        5.6
        PSC-76_R1_001
        314.2bp
        37.7%
        8.5
        PSC-78_R1_001
        285.6bp
        31.9%
        6.9
        PSC-81_R1_001
        295.7bp
        37.6%
        9.7
        PSC-83_R1_001
        288.6bp
        37.7%
        9.6

        Kallisto

        Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.DOI: 10.1038/nbt.3519.

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        MultiQC v1.12 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.