Sample FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences Bowtie 2 / HiSAT2_mqc-generalstats-bowtie_2_hisat2-overall_alignment_rate PSC-19_R1_001 62.91174966336068 42.0 147.53932457642543 18.181818181818183 23469776.0 PSC-19_R2_001 61.00027675613138 42.0 147.54332670239376 18.181818181818183 23469776.0 PSC-19_hisat 81.54 PSC-23_R1_001 61.30411163988707 42.0 147.87488972146673 18.181818181818183 23607269.0 PSC-23_R2_001 59.206328874498226 42.0 147.87763887470422 18.181818181818183 23607269.0 PSC-23_hisat 79.29 PSC-24_R1_001 59.99015832555709 41.0 147.96935550546593 18.181818181818183 22748556.0 PSC-24_R2_001 58.059554363073296 41.0 147.97239095088057 18.181818181818183 22748556.0 PSC-24_hisat 74.69 PSC-34_R1_001 92.94080555180781 34.0 146.5962798608695 27.27272727272727 28383132.0 PSC-34_R2_001 92.11672918752112 34.0 146.51955647459906 27.27272727272727 28383132.0 PSC-34_hisat 10.27 PSC-35_R1_001 89.1947016716363 34.0 146.7596938575527 27.27272727272727 26379746.0 PSC-35_R2_001 88.38327057306196 34.0 146.68107581475576 27.27272727272727 26379746.0 PSC-35_hisat 16.14 PSC-36_R1_001 84.4420176934402 36.0 144.0378938163845 27.27272727272727 21277746.0 PSC-36_R2_001 83.48112684627418 36.0 144.03729417580226 27.27272727272727 21277746.0 PSC-36_hisat 24.29 PSC-37_R1_001 90.51478696180834 34.0 146.80587925539737 27.27272727272727 17154009.0 PSC-37_R2_001 89.76466051292425 34.0 146.7402051030753 18.181818181818183 17154009.0 PSC-37_hisat 10.2 PSC-38_R1_001 91.41476549137974 33.0 147.31458554395385 27.27272727272727 28364962.0 PSC-38_R2_001 90.59453414074507 33.0 147.32212022706042 27.27272727272727 28364962.0 PSC-38_hisat 11.55 PSC-39_R1_001 90.33499985327047 34.0 146.84164493952352 36.36363636363637 22631446.0 PSC-39_R2_001 89.96318043374862 34.0 143.99783407564854 36.36363636363637 22631446.0 PSC-39_hisat 15.05 PSC-40_R1_001 89.42962916073752 34.0 146.8167764826697 27.27272727272727 21152503.0 PSC-40_R2_001 88.6029171639102 34.0 146.8136111362329 27.27272727272727 21152503.0 PSC-40_hisat 13.88 PSC-42_R1_001 57.8386152825425 42.0 147.8632280836175 18.181818181818183 20804015.0 PSC-42_R2_001 55.17452352751433 42.0 147.86570077939282 18.181818181818183 20804015.0 PSC-42_hisat 80.37 PSC-43_R1_001 67.77605183560041 42.0 147.8954421057784 18.181818181818183 22105954.0 PSC-43_R2_001 65.08636775659627 42.0 147.89783937847696 18.181818181818183 22105954.0 PSC-43_hisat 81.94 PSC-48_R1_001 59.934666635788176 41.0 147.7149187802268 18.181818181818183 19277387.0 PSC-48_R2_001 58.10066113170293 41.0 147.71783105251765 18.181818181818183 19277387.0 PSC-48_hisat 78.38 PSC-49_R1_001 63.217550045298005 41.0 147.82954447805923 18.181818181818183 21854798.0 PSC-49_R2_001 61.01024640220219 41.0 147.83269399241303 18.181818181818183 21854798.0 PSC-49_hisat 77.7 PSC-52_R1_001 59.294265401642825 42.0 147.36126129510575 18.181818181818183 22093640.0 PSC-52_R2_001 57.26085687198189 42.0 147.36519690734528 18.181818181818183 22093640.0 PSC-52_hisat 79.52 PSC-54_R1_001 62.46442903641225 42.0 146.80617544801038 18.181818181818183 25091718.0 PSC-54_R2_001 60.5527023648816 42.0 146.81155543036152 18.181818181818183 25091718.0 PSC-54_hisat 80.41 PSC-56_R1_001 56.575867097277985 42.0 148.25571363702977 18.181818181818183 20798136.0 PSC-56_R2_001 55.14229175732116 42.0 148.25809091737835 18.181818181818183 20798136.0 PSC-56_hisat 74.95 PSC-57_R1_001 64.14471535399838 42.0 148.16619609810598 18.181818181818183 22483440.0 PSC-57_R2_001 61.76232621640263 42.0 148.16790242062604 18.181818181818183 22483440.0 PSC-57_hisat 83.38 PSC-58_R1_001 60.747070166756124 41.0 147.68751331342204 18.181818181818183 22500789.0 PSC-58_R2_001 58.72189396707536 42.0 147.69073217832494 18.181818181818183 22500789.0 PSC-58_hisat 80.22 PSC-59_R1_001 61.36991991514187 41.0 147.9968645238354 18.181818181818183 22471547.0 PSC-59_R2_001 59.46635941075835 41.0 147.9994006198149 18.181818181818183 22471547.0 PSC-59_hisat 78.16 PSC-61_R1_001 58.66853178030796 41.0 148.1051131422849 18.181818181818183 19883194.0 PSC-61_R2_001 56.802793741567534 41.0 148.10684752158028 18.181818181818183 19883194.0 PSC-61_hisat 78.88 PSC-63_R1_001 60.12944973266688 41.0 148.33941246037836 18.181818181818183 21332723.0 PSC-63_R2_001 57.91419495858652 41.0 148.34122887171975 18.181818181818183 21332723.0 PSC-63_hisat 80.54 PSC-64_R1_001 62.0129877603087 42.0 147.43951590400945 18.181818181818183 24101501.0 PSC-64_R2_001 59.81923644387676 42.0 147.44327147923278 18.181818181818183 24101501.0 PSC-64_hisat 80.74 PSC-67_R1_001 55.94623728208629 41.0 147.04476532712357 18.181818181818183 24528314.0 PSC-67_R2_001 54.59589248225483 41.0 147.053355889035 18.181818181818183 24528314.0 PSC-67_hisat 77.43 PSC-69_R1_001 61.5954636828671 40.0 148.51408962974043 18.181818181818183 22802409.0 PSC-69_R2_001 59.02152785118972 40.0 148.51655612352187 18.181818181818183 22802409.0 PSC-69_hisat 78.04 PSC-71_R1_001 62.20178461840097 42.0 148.0435919772404 18.181818181818183 26600124.0 PSC-71_R2_001 59.677590966785566 42.0 148.04563456170354 18.181818181818183 26600124.0 PSC-71_hisat 77.86 PSC-73_R1_001 61.20899120725239 41.0 147.86627214087102 18.181818181818183 25168443.0 PSC-73_R2_001 58.52687087107982 41.0 147.86907612838823 18.181818181818183 25168443.0 PSC-73_hisat 79.46 PSC-75_R1_001 41.82224502569943 40.0 147.32613552492225 0.0 24371724.0 PSC-75_R2_001 40.30910933969184 40.0 147.3275989831495 0.0 24371724.0 PSC-75_hisat 46.64 PSC-76_R1_001 57.63529815665802 41.0 148.09300172187503 18.181818181818183 22423230.0 PSC-76_R2_001 55.39379079950281 41.0 148.09436388067198 18.181818181818183 22423230.0 PSC-76_hisat 79.2 PSC-78_R1_001 62.656748191889086 39.0 147.31339087410194 18.181818181818183 21462348.0 PSC-78_R2_001 61.332752319370115 39.0 147.32109604224104 18.181818181818183 21462348.0 PSC-78_hisat 63.38 PSC-81_R1_001 58.79846962521779 42.0 147.42815953171134 18.181818181818183 25846623.0 PSC-81_R2_001 57.0123892246266 42.0 147.4313919849413 18.181818181818183 25846623.0 PSC-81_hisat 77.8 PSC-83_R1_001 64.5650361695441 41.0 147.18422249015381 18.181818181818183 25489092.0 PSC-83_R2_001 62.46536998407427 41.0 147.18912427323815 18.181818181818183 25489092.0 PSC-83_hisat 81.7 hisat 81.7