-- SlopBed creates a list of start & stop that include genes +/- 2000kb (gene regions) -- intersectBed identifies gene regions which contain methylated loci. Resulting file is "meth_filter_gene.2kbslop.tab", which contains methylated locus info and the gene region start/stop (start can be -2kb and stop can be +2kb from gene body). rsync --archive --progress --verbose /Volumes/Peach\ Backup/QuantSeq-04-21-2020 /Volumes/web/nightingales/O_lurida /Volumes/web-1/nightingales/O_lurida /Users/lhs3/Documents/2020-04-21_QuantSeq-data rsync --archive --progress --verbose /Users/lhs3/Documents/2020-04-21_QuantSeq-data /Volumes/web-1/nightingales/O_lurida